Gene: AT1G08560

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G08560
  • Transcript Identifier AT1G08560.1
  • Gene Type Coding gene
  • Location Chr1 : 2709778-2710710 : negative

Gene Family Information

  • ID HOM05D000492
  • #Genes/#Species 1080/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G08560.1
  • symbol SYP111
  • Alias ATSYP111,KN,KNOLLE
  • full_name syntaxin of plants 111
  • uniprot Q42374

Descriptions

  • Description syntaxin of plants 111
  • Computational description syntaxin of plants 111 (SYP111); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, response to cyclopentenone, cellular membrane fusion; LOCATED IN: endomembrane system, plasma membrane, phragmoplast, cell plate; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 124 (TAIR:AT1G61290.1); Has 2504 Blast hits to 2496 proteins in 285 species: Archae - 12; Bacteria - 41; Metazoa - 1133; Fungi - 466; Plants - 469; Viruses - 2; Other Eukaryotes - 381 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IBA
TAS
Gene Ontologyintracellular protein transport1 2
GO:0015031
IEA
GOA Databaseprotein transport
GO:0051301
IEA
GOA Databasecell division
GO:0007049
IEA
GOA Databasecell cycle
GO:0048278
IBA
Gene Ontologyvesicle docking2
GO:0006906
IBA
Gene Ontologyvesicle fusion2
GO:0006887
IBA
Gene Ontologyexocytosis2
GO:0061025
TAS
Gene Ontologymembrane fusion1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005484
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IBA
TAS
Gene OntologySNAP receptor activity1 2
GO:0000149
IBA
Gene OntologySNARE binding2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
IBA
Gene Ontologyplasma membrane2 3
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IBA
Gene Ontologyintegral component of membrane2
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma4
GO:0012505
IDA
IBA
Gene Ontologyendomembrane system2 5
GO:0031201
IBA
Gene OntologySNARE complex2
GO:0009524
IDA
Gene Ontologyphragmoplast6
GO:0009504
IDA
Gene Ontologycell plate5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006011 Syntaxin, N-terminal domain
IPR010989 SNARE
IPR000727 Target SNARE coiled-coil homology domain
Mapman id Description
13.4.2.3.1 Cell cycle organisation.cytokinesis.cell-plate formation.SNARE cell-plate vesicle fusion complex.Qa-SNARE component KNOLLE
22.3.5.1.1.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qa-type SNARE components.SYP1-group component