Gene: AT1G08465
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G08465
- Transcript Identifier AT1G08465.1
- Gene Type Coding gene
- Location Chr1 : 2676033-2679382 : positive
Gene Family Information
- ID HOM05D000685
- #Genes/#Species 834/94
- Phylogenetic origin
- ID ORTHO05D000511
- #Genes/#Species 832/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT1G08465.1
- symbol YAB2
- full_name YABBY2
- uniprot Q9XFB0
Descriptions
- Description Plant-specific transcription factor YABBY family protein
- Computational description YABBY2 (YAB2); CONTAINS InterPro DOMAIN/s: High mobility group, superfamily (InterPro:IPR009071), YABBY protein (InterPro:IPR006780); BEST Arabidopsis thaliana protein match is: plant-specific transcription factor YABBY family protein (TAIR:AT2G26580.2); Has 446 Blast hits to 444 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 433; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010158 | IDA IBA | Gene Ontology | abaxial cell fate specification | 1 2 |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | ISS | Gene Ontology | regulation of transcription, DNA-templated | 3 |
| GO:0045165 | IBA | Gene Ontology | cell fate commitment | 2 |
| GO:0007275 | IEA | InterPro | multicellular organism development | |
| GO:0048530 | ISO | PLAZA Integrative Orthology | fruit morphogenesis | Solyc11g071810.2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 3 |
| GO:0000976 | IPI | Gene Ontology | transcription cis-regulatory region binding | 4 |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM, IBA | Gene Ontology | nucleus | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.1.4 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (YABBY) |