Gene: AT1G08050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G08050
  • Transcript Identifier AT1G08050.1
  • Gene Type Coding gene
  • Location Chr1 : 2499088-2501311 : negative

Gene Family Information

  • ID HOM05D000620
  • #Genes/#Species 922/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G08050.1
  • uniprot Q9LN03

Descriptions

  • Description Zinc finger (C3HC4-type RING finger) family protein
  • Computational description Zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Zinc finger (C3HC4-type RING finger) family protein (TAIR:AT5G60710.1); Has 3591 Blast hits to 3577 proteins in 633 species: Archae - 55; Bacteria - 1268; Metazoa - 812; Fungi - 224; Plants - 715; Viruses - 5; Other Eukaryotes - 512 (source: NCBI BLink).
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Functional Annotation

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005886
IDA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032838 VWA-Hint protein, Vwaint domain
IPR002035 von Willebrand factor, type A
IPR036465 von Willebrand factor A-like domain superfamily
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated