Gene: AT1G07140
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G07140
- Transcript Identifier AT1G07140.1
- Gene Type Coding gene
- Location Chr1 : 2192360-2193688 : negative
Gene Family Information
- ID HOM05D002258
- #Genes/#Species 298/98
- Phylogenetic origin
- ID ORTHO05D002539
- #Genes/#Species 281/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G07140.1
- symbol SIRANBP
- uniprot Q9LMK7
Descriptions
- Description Pleckstrin homology (PH) domain superfamily protein
- Computational description SIRANBP; FUNCTIONS IN: Ran GTPase binding; INVOLVED IN: intracellular transport, protein import into nucleus, translocation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ran binding protein 1 (InterPro:IPR000156), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: Pleckstrin homology (PH) domain superfamily protein (TAIR:AT2G30060.1); Has 2132 Blast hits to 1580 proteins in 275 species: Archae - 9; Bacteria - 76; Metazoa - 1014; Fungi - 369; Plants - 163; Viruses - 39; Other Eukaryotes - 462 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046907 | IEA | Gene Ontology | intracellular transport | |
| GO:0046907 | IEA | InterPro | intracellular transport | |
| GO:0050790 | IEA | GOA Database | regulation of catalytic activity | |
| GO:0051028 | IEA | GOA Database | mRNA transport | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005096 | IBA | Gene Ontology | GTPase activator activity | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005829 | HDA | Gene Ontology | cytosol | 2 |
| GO:0005576 | HDA | Gene Ontology | extracellular region | 3 |
| GO:0005643 | IEA | GOA Database | nuclear pore | |
| GO:0005643 | IBA | Gene Ontology | nuclear pore | 1 |
| GO:0005737 | IBA | Gene Ontology | cytoplasm | 1 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 23.5.1.5 | Protein translocation.nucleus.nucleocytoplasmic transport.Ran-activation accessory protein (RanBP1) |