Gene: AT1G06260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G06260
  • Transcript Identifier AT1G06260.1
  • Gene Type Coding gene
  • Location Chr1 : 1916449-1917585 : positive

Gene Family Information

  • ID HOM05D000069
  • #Genes/#Species 3952/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G06260.1
  • uniprot Q9LNC1

Descriptions

  • Description Cysteine proteinases superfamily protein
  • Computational description Cysteine proteinases superfamily protein; FUNCTIONS IN: cysteine-type peptidase activity, cysteine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Granulin repeat cysteine protease family protein (TAIR:AT3G19390.1); Has 7835 Blast hits to 7772 proteins in 746 species: Archae - 66; Bacteria - 269; Metazoa - 3267; Fungi - 4; Plants - 1872; Viruses - 136; Other Eukaryotes - 2221 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051603
IBA
Gene Ontologyproteolysis involved in cellular protein catabolic process1
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004197
IBA
Gene Ontologycysteine-type endopeptidase activity1
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0008234
IEA
InterProcysteine-type peptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0005764
IBA
Gene Ontologylysosome1
GO:0005615
IBA
Gene Ontologyextracellular space1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013201 Cathepsin propeptide inhibitor domain (I29)
IPR000668 Peptidase C1A, papain C-terminal
IPR039417 Papain-like cysteine endopeptidase
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
50.3.4 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)