Gene: AT1G05890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G05890
  • Transcript Identifier AT1G05890.1
  • Gene Type Coding gene
  • Location Chr1 : 1779631-1784166 : positive

Gene Family Information

  • ID HOM05D000554
  • #Genes/#Species 991/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G05890.1
  • symbol ARI5
  • Alias ATARI5,ARABIDOPSIS ARIADNE 5
  • full_name ARIADNE 5
  • uniprot Q8L829

Descriptions

  • Description RING/U-box superfamily protein
  • Computational description ARIADNE 5 (ARI5); FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT2G31510.1); Has 3031 Blast hits to 3006 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 1283; Fungi - 592; Plants - 643; Viruses - 7; Other Eukaryotes - 506 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0032436
IBA
Gene Ontologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process1
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
Gene Ontologyubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0031624
IBA
Gene Ontologyubiquitin conjugating enzyme binding1
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0000151
IBA
Gene Ontologyubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031127 E3 ubiquitin ligase RBR family
IPR002867 IBR domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.E3 ubiquitin ligase (RBR-Ariadne)