Gene: AT1G03950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G03950
  • Transcript Identifier AT1G03950.1
  • Gene Type Coding gene
  • Location Chr1 : 1011388-1013212 : negative

Gene Family Information

  • ID HOM05D002330
  • #Genes/#Species 291/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G03950.1
  • symbol VPS2.3
  • uniprot Q941D5

Descriptions

  • Description vacuolar protein sorting-associated protein 2.3
  • Computational description vacuolar protein sorting-associated protein 2.3 (VPS2.3); CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024); BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT5G44560.1); Has 1693 Blast hits to 1691 proteins in 237 species: Archae - 2; Bacteria - 12; Metazoa - 754; Fungi - 334; Plants - 366; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
ISS
Gene Ontologyvesicle-mediated transport1
GO:0032509
IBA
Gene Ontologyendosome transport via multivesicular body sorting pathway2
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IBA
Gene Ontologyprotein transport2
GO:0045324
IBA
Gene Ontologylate endosome to vacuole transport2
GO:0007034
IEA
GOA Databasevacuolar transport
GO:0007034
IEA
InterProvacuolar transport

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000815
ISS, IBA
Gene OntologyESCRT III complex2 3
GO:0005771
IBA
Gene Ontologymultivesicular body2
GO:0005768
IEA
GOA Databaseendosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005024 Snf7 family
Mapman id Description
22.4.1.3.3 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-III complex.component VPS2/CHMP2