Gene: AL7G28050
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL7G28050
- Transcript Identifier AL7G28050.t1
- Gene Type Coding gene
- Location scaffold_7 : 7290880-7292600 : positive
Gene Family Information
- ID HOM05D002348
- #Genes/#Species 289/96
- Phylogenetic origin
- ID ORTHO05D002512
- #Genes/#Species 283/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id AL7G28050.v2.1
- synonym 492324
- synonym fgenesh2_kg.7__1757__AT4G25100.2
- pacid 35937438
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009642 | ISO | PLAZA Integrative Orthology | response to light intensity | AT4G25100 |
| GO:0019430 | ISO | PLAZA Integrative Orthology | removal of superoxide radicals | AT4G25100 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT4G25100 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT4G25100 |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G25100 |
| GO:0046688 | ISO | PLAZA Integrative Orthology | response to copper ion | AT4G25100 |
| GO:0010193 | ISO | PLAZA Integrative Orthology | response to ozone | AT4G25100 |
| GO:0006801 | IEA | InterPro | superoxide metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004784 | IEA | InterPro | superoxide dismutase activity | |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT4G25100 |
| GO:0046872 | IEA | InterPro | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT4G25100 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G25100 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G25100 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT4G25100 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G25100 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT4G25100 |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G25100 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036314 | Manganese/iron superoxide dismutase, C-terminal domain superfamily |
| IPR001189 | Manganese/iron superoxide dismutase |
| IPR036324 | Manganese/iron superoxide dismutase, N-terminal domain superfamily |
| IPR019831 | Manganese/iron superoxide dismutase, N-terminal |
| IPR019832 | Manganese/iron superoxide dismutase, C-terminal |
| Mapman id | Description |
|---|---|
| 10.2.1.1 | Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.iron superoxide dismutase (FSD) |