Gene: AL5G25890

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL5G25890
  • Transcript Identifier AL5G25890.t1
  • Gene Type Coding gene
  • Location scaffold_5 : 12862899-12863903 : positive

Gene Family Information

  • ID HOM05D001620
  • #Genes/#Species 399/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL5G25890.v2.1
  • synonym fgenesh2_kg.5__1050__AT3G46870.1
  • pacid 35919073

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G46870
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT3G46870
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT3G46870
GO:1990825
ISO
PLAZA Integrative Orthologysequence-specific mRNA binding AT3G46870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR044795 Pentatricopeptide repeat-containing protein THA8L-like
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
16.11.4.1.1.7 RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.splicing factor (THA8)