Gene: AL4G46490
General Information
Structural Information
- Species Arabidopsis lyrata
- Gene Identifier AL4G46490
- Transcript Identifier AL4G46490.t1
- Gene Type Coding gene
- Location scaffold_4 : 22859992-22864697 : negative
Gene Family Information
- ID HOM05D000068
- #Genes/#Species 3957/100
- Phylogenetic origin
- ID ORTHO05D000084
- #Genes/#Species 2339/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id AL4G46490.v2.1
- synonym fgenesh2_kg.4__2931__AT2G47000.1
- synonym 483871
- pacid 35922785
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | ISO | PLAZA Integrative Orthology | response to auxin | AT2G47000 |
| GO:0010540 | ISO | PLAZA Integrative Orthology | basipetal auxin transport | AT2G47000 |
| GO:0010315 | ISO | PLAZA Integrative Orthology | auxin efflux | AT2G47000 |
| GO:0060919 | ISO | PLAZA Integrative Orthology | auxin influx | AT2G47000 |
| GO:0009926 | ISO | PLAZA Integrative Orthology | auxin polar transport | AT2G47000 |
| GO:0009735 | ISO | PLAZA Integrative Orthology | response to cytokinin | AT2G47000 |
| GO:0009630 | ISO | PLAZA Integrative Orthology | gravitropism | AT2G47000 |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT2G47000 |
| GO:0055085 | IEA | InterPro | transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010328 | ISO | PLAZA Integrative Orthology | auxin influx transmembrane transporter activity | AT2G47000 |
| GO:0010329 | ISO | PLAZA Integrative Orthology | auxin efflux transmembrane transporter activity | AT2G47000 |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0008559 | ISO | PLAZA Integrative Orthology | ABC-type xenobiotic transporter activity | AT2G47000 |
| GO:0140359 | IEA | InterPro | ABC-type transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT2G47000 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G47000 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G47000 |
| GO:0016021 | IEA | InterPro | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011527 | ABC transporter type 1, transmembrane domain |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR036640 | ABC transporter type 1, transmembrane domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| IPR039421 | Type 1 protein exporter |
| Mapman id | Description |
|---|---|
| 24.1.3.1.1 | Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter |