Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TPR.G3189 Tp57577_TGAC_v2_LG1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G9800 LG-1 + View
Acer truncatum Atru.chr4.2911 chr4 + View
Acer truncatum Atru.chr5.1102 chr5 - View
Actinidia chinensis Actinidia21435 Lachesis_group19 + View
Actinidia chinensis Actinidia33276 Lachesis_group24 + View
Actinidia chinensis Actinidia21030 Lachesis_group9 + View
Avicennia marina MSTRG.21646 ScioBoG_26769_HRSCAF_26899 + View
Amaranthus hybridus Ah.15g093080 Exopolygalacturonase clone GBGE184 (ExoPG) (EC 3.2.1.67) (Galacturan 1,4-alpha-galacturonidase) (Pectinase) AmaHy_arrow1_Scaffold_15 + View
Aquilegia oxysepala Aqoxy5G00791 CHR05 + View
Aquilegia oxysepala Aqoxy2G02888 CHR02 - View
Arabidopsis thaliana AT1G02790 polygalacturonase 4 encodes a exopolygalacturonase. polygalacturonase 4 (PGA4)%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT3G07830.1)%3B Has 4155 Blast hits to 4140 proteins in 501 species: Archae - 6%3B Bacteria - 1251%3B Metazoa - 14%3B Fungi - 1275%3B Plants - 1482%3B Viruses - 0%3B Other Eukaryotes - 127 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC07g42302 ChrC07 + View
Brassica napus A09p68530 A09 + View
Beta vulgaris EL10Ac7g17557 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0001171 hypothetical protein CICLE_v10033386mg, partial [Citrus clementina] Chr3 - View
Camellia sinensis var. sinensis CSS0021519 hypothetical protein CICLE_v10027137mg [Citrus clementina] Chr10 + View
Camellia sinensis var. sinensis CSS0026272 PREDICTED: exopolygalacturonase [Vitis vinifera] Chr13 + View
Capsicum annuum CAN.G1280.11 PGAv.1.6.scaffold1280 + View
Cannabis sativa CANSAT78G1944 NC_044376.1 + View
Cannabis sativa CANSAT25G3474 NC_044370.1 - View
Cicer arietinum L. Ca_10321_v3 Ca_LG4_v3 - View
Corylus avellana Haze_01154 Similar to plaa2: Exopolygalacturonase (Fragment) (Platanus acerifolia OX%3D140101) 1 - View
Corylus avellana Haze_04973 Similar to PGA3: Exopolygalacturonase clone GBGE184 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc01_g21060 Putative Exopolygalacturonase clone GBGE184 chr1 + View
Coffea canephora Cc03_g01490 Putative Exopolygalacturonase (Fragment) chr3 - View
Citrus clementina Ciclev10023712m.g scaffold_3 + View
Carpinus fangiana Cfa005878 Cfa02 - View
Carya illinoinensis CiPaw.02G079500 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Chr02 - View
Carya illinoinensis CiPaw.08G093100 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Chr08 - View
Carya illinoinensis CiPaw.07G111500 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Chr07 + View
Carica papaya Cpa.g.sc151.22 supercontig_151 + View
Chenopodium quinoa AUR62025530 Protein of unknown function C_Quinoa_Scaffold_2773 - View
Chenopodium quinoa AUR62008700 PGA3: Exopolygalacturonase clone GBGE184 C_Quinoa_Scaffold_1710 + View
Capsella rubella Carub.0001s0188 PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 scaffold_1 - View
Cucumis sativus L. CsaV3_7G029460 exopolygalacturonase-like chr7 - View
Daucus carota DCAR_027051 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv29718 GWHABJS00000016 - View
Davidia involucrata Dinv33072 GWHABJS00000010 + View
Durio zibethinus Duzib212G0798 NW_019168026.1 - View
Durio zibethinus Duzib052G0068 NW_019167849.1 + View
Eucalyptus grandis Eucgr.H01088 Chr08 - View
Erythranthe guttata Migut.N01516 scaffold_14 + View
Erythranthe guttata Migut.D00134 scaffold_4 - View
Eutrema salsugineum Thhalv10007721m.g PTHR31375:SF17 - EXOPOLYGALACTURONASE CLONE GBGE184 scaffold_5 + View
Fragaria x ananassa FAN24G2438 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Fvb2-2 - View
Fragaria x ananassa FAN15G1341 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Fvb2-4 + View
Fragaria x ananassa FAN20G0660 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Fvb2-3 + View
Fragaria vesca FvH4_2g26010 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Fvb2 + View
Fragaria vesca FvH4_4g18750 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Fvb4 + View
Gossypium hirsutum Gohir.D10G172800 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) D10 + View
Gossypium hirsutum Gohir.A02G051100 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) A02 + View
Gossypium hirsutum Gohir.D02G056000 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) D02 + View
Gossypium hirsutum Gohir.A10G166800 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) A10 + View
Glycine max Glyma.09G041600 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Gm09 - View
Glycine max Glyma.02G016300 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Gm02 - View
Glycine max Glyma.07G245100 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Gm07 - View
Gossypium raimondii Gorai.005G061900 Chr05 + View
Gossypium raimondii Gorai.011G193300 Chr11 + View
Lupinus albus Lalb_Chr06g0166551 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Lalb_Chr06 + View
Lupinus albus Lalb_Chr21g0309291 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Lalb_Chr21 + View
Lotus japonicus Lj6g0019058 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) chr6 + View
Lotus japonicus Lj5g0008398 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase chr5 + View
Magnolia biondii MBI18_g21786_MAGBIO AED:0.09 Chr18 + View
Malus domestica MD13G1163700 polygalacturonase 4 Chr13 - View
Malus domestica MD16G1163200 polygalacturonase 4 Chr16 - View
Malus domestica MD03G1291400 polygalacturonase 4 Chr03 + View
Malus domestica MD11G1306900 polygalacturonase 4 Chr11 - View
Manihot esculenta Manes.03G199100 Chromosome03 + View
Medicago truncatula Medtr1g088160 polygalacturonase chr1 - View
Nelumbo nucifera Nn3g21552 chr3 + View
Petunia axillaris Peaxi162Scf00399g00038 Pectin lyase-like superfamily protein Peaxi162Scf00399 - View
Punica granatum PGR119G0983 NC_045132.1 + View
Punica granatum PGR031G3387 NC_045127.1 + View
Prunus persica Prupe.8G264500 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Pp08 + View
Pisum sativum Psat6g163960 Glycosyl hydrolases family 28 chr6LG2 + View
Populus trichocarpa Potri.002G202100 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Chr02 - View
Phaseolus vulgaris Phvul.007G218300 Chr07 - View
Phaseolus vulgaris Phvul.009G251500 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Chr09 + View
Quercus lobata QL06p010741 6 + View
Quercus lobata QL12p027891 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0294381 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim02G0006800 chr02 - View
Rhododendron simsii Rhsim01G0287100 chr01 + View
Rhododendron simsii Rhsim13G0008500 chr13 - View
Striga asiatica SGA_v2.0_scaffold1G00347 scaffold1 - View
Salvia bowleyana SalBow2G0843 GWHASIU00000007 - View
Salix brachista Sabra02G0156900 GWHAAZH00000002 + View
Simmondsia chinensis Sc05g0003620 GWHAASQ00000005 - View
Sechium edule Sed0012424 LG09 - View
Solanum lycopersicum Solyc06g009200.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** B4FX45_MAIZE) SL4.0ch06 + View
Solanum pennellii Sopen06g003970 encodes a exopolygalacturonase. | polygalacturonase 4 (PGA4) | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG401017934 NTS1 protein ST4.03ch06 - View
Selenicereus undatus Hund18193 Scaffold_33675 + View
Theobroma cacao Thecc.04G289800 Pectin lyase-like superfamily protein Chromosome_4 + View
Theobroma cacao Thecc.01G304300 Polygalacturonase 4 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104825959 exopolygalacturonase clone GBGE184-like NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104801285 exopolygalacturonase clone GBGE184-like NW_010969548.1 + View
Tripterygium wilfordii TWI53G1190 NC_052244.1 + View
Tripterygium wilfordii TWI09G0386 NC_052245.1 + View
Vaccinium macrocarpon vmacro15208 Similar to plaa2: Exopolygalacturonase (Fragment) (Platanus acerifolia OX%3D140101) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro15142 Similar to PGA3: Exopolygalacturonase clone GBGE184 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1309G1021 CM024072.1 - View
Vigna mungo VMungo0720G2389 CM024071.1 + View
Vitis vinifera GSVIVG01028044001 chr7 + View