Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sp1g15300 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) ch1-1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G2000 LG-7 + View
Arabidopsis lyrata AL1G29380 scaffold_1 + View
Arabidopsis lyrata AL2G38770 scaffold_2 - View
Arabidopsis thaliana AT1G78400 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein (TAIR:AT2G33160.1)%3B Has 3713 Blast hits to 3693 proteins in 464 species: Archae - 4%3B Bacteria - 847%3B Metazoa - 14%3B Fungi - 1259%3B Plants - 1481%3B Viruses - 0%3B Other Eukaryotes - 108 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB03g16015 ChrB03 - View
Brassica carinata BcaC08g47414 ChrC08 - View
Brassica napus C05p15540 C05 + View
Brassica napus A06p13060 A06 + View
Brassica napus A07p43660 A07 - View
Brassica napus C06p52340 C06 - View
Brassica oleracea BolC6t40254H C6 - View
Brassica rapa BraA07t31878Z A07 - View
Brassica rapa BraA06t24465Z A06 + View
Corylus avellana Haze_08494 Similar to plaa2: Exopolygalacturonase (Fragment) (Platanus acerifolia OX%3D140101) 4 + View
Citrus clementina Ciclev10023493m.g scaffold_3 - View
Cardamine hirsuta CARHR017730 Polygalacturonase-like protein Chr1 + View
Cardamine hirsuta CARHR071920 Pectin lyase-like protein Chr2 - View
Citrullus lanatus ClCG07G010520 Polygalacturonase, putative CG_Chr07 + View
Cucumis melo MELO3C016158.2 exopolygalacturonase chr07 + View
Capsella rubella Carub.0002s2530 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase scaffold_2 - View
Durio zibethinus Duzib268G0830 NW_019168270.1 + View
Durio zibethinus Duzib213G0542 NW_019167993.1 + View
Eutrema salsugineum Thhalv10009641m.g K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) scaffold_5 - View
Eutrema salsugineum Thhalv10018650m.g 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase scaffold_9 + View
Fragaria x ananassa FAN21G3528 PTHR31375//PTHR31375:SF10 - FAMILY NOT NAMED // GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Fvb3-2 + View
Gossypium hirsutum Gohir.A01G041700 PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED A01 - View
Gossypium hirsutum Gohir.D01G029250 PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED D01 - View
Gossypium raimondii Gorai.002G038500 Chr02 - View
Malus domestica MD05G1208400 Pectin lyase-like superfamily protein Chr05 - View
Prunus persica Prupe.4G149100 PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Pp04 + View
Populus trichocarpa Potri.001G377700 PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Chr01 - View
Quercus lobata QL04p070452 4 + View
Salix brachista Sabra16G0248800 GWHAAZH00000016 - View
Simmondsia chinensis Sc23g0000400 GWHAASQ00000023 - View
Sechium edule Sed0013188 LG13 + View
Theobroma cacao Thecc.07G146800 Pectin lyase-like superfamily protein Chromosome_7 + View
Tarenaya hassleriana THA.LOC104813975 exopolygalacturonase NW_010965373.1 - View
Tripterygium wilfordii TWI38G1213 NC_052252.1 + View
Vitis vinifera GSVIVG01020794001 chr12 - View