Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.2045 chr4 - View
Arabidopsis lyrata AL3G37990 scaffold_3 + View
Avicennia marina MSTRG.21918 ScioBoG_3008_HRSCAF_3015 + View
Amaranthus hybridus Ah.11g049630 AmaHy_arrow1_Scaffold_11 - View
Arabidopsis thaliana AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 (TAIR:AT3G12770.1)%3B Has 38045 Blast hits to 13879 proteins in 261 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 50%3B Fungi - 109%3B Plants - 37267%3B Viruses - 0%3B Other Eukaryotes - 609 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC05g27940 ChrC05 + View
Brassica carinata BcaC06g35509 ChrC06 + View
Brassica napus C07p14080 C07 - View
Brassica napus A07p09130 A07 - View
Brassica napus A05p25360 A05 + View
Brassica napus A01p32110 A01 + View
Brassica oleracea BolC7t41905H C7 - View
Brassica rapa BraA01t03336Z A01 + View
Brassica rapa BraA07t28707Z A07 - View
Brassica rapa BraA05t21421Z A05 + View
Beta vulgaris EL10Ac3g04993 KOG3485 - Uncharacterized conserved protein Chr3_EL10_PGA_scaffold7 - View
Cannabis sativa CANSAT78G1574 NC_044376.1 - View
Corylus avellana Haze_11397 Similar to PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc03_g05650 Putative pentatricopeptide repeat-containing protein At3g23330 chr3 + View
Citrus clementina Ciclev10006568m.g scaffold_9 + View
Cardamine hirsuta CARHR119050 Pentatricopeptide repeat-containing protein Chr4 + View
Cardamine hirsuta CARHR099300 Pentatricopeptide repeat-containing protein Chr3 + View
Carya illinoinensis CiPaw.01G183200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr01 - View
Chenopodium quinoa AUR62015556 PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 C_Quinoa_Scaffold_2751 - View
Chenopodium quinoa AUR62002148 PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 C_Quinoa_Scaffold_4480 + View
Capsella rubella Carub.0003s2358 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_3 + View
Erythranthe guttata Migut.N00280 scaffold_14 + View
Eutrema salsugineum Thhalv10020184m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_13 - View
Fragaria x ananassa FAN17G2991 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-2 - View
Fragaria vesca FvH4_4g03820 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4 + View
Glycine max Glyma.03G161200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm03 + View
Helianthus annuus HanXRQChr03g0091551 Putative tetratricopeptide-like helical domain HanXRQChr03 + View
Hydrangea macrophylla Hma1.2p1_0267F.1_g107210 Hma1.2p1_0267F.1 - View
Lupinus albus Lalb_Chr01g0019561 K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) Lalb_Chr01 - View
Lotus japonicus Lj1g0010012 K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) chr1 - View
Lonicera japonica Lj2C1154T14 GWHAAZE00000002 + View
Lonicera japonica Lj3A692T59 GWHAAZE00000003 - View
Magnolia biondii MBI07_g16896_MAGBIO AED:0.01 Chr07 + View
Magnolia biondii MBI04_g10915_MAGBIO AED:0.33 Chr04 - View
Malus domestica MD13G1215400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr13 + View
Malus domestica MD10G1243200 Pentatricopeptide repeat (PPR) superfamily protein Chr10 - View
Manihot esculenta Manes.15G041900 Chromosome15 + View
Nelumbo nucifera Nn3g19691 chr3 + View
Nelumbo nucifera Nn1g02829 chr1 + View
Nicotiana tabacum Nitab4.5_0000044g0400 Tetratricopeptide-like helical, Pentatricopeptide repeat Nitab4.5_0000044 + View
Punica granatum PGR004G1555 NC_045131.1 - View
Punica granatum PGR031G1198 NC_045127.1 + View
Prunus persica Prupe.1G040600 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 + View
Phaseolus vulgaris Phvul.001G159100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr01 + View
Rosa chinensis RcHm_v2.0_Chr4g0393661 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim04G0179400 chr04 - View
Striga asiatica SGA_v2.0_scaffold138G35197 scaffold138 - View
Simmondsia chinensis Sc25g0003720 GWHAASQ00000025 - View
Solanum lycopersicum Solyc09g090220.3 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QEC4_9MAGN) SL4.0ch09 + View
Solanum pennellii Sopen09g027850 Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent proteinñprotein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression. | breast cancer associated RING 1 (BARD1) | FUNCTIONS IN: transcription coactivator activity, DNA binding | INVOLVED IN: DNA repair, regulation of meristem structural organization, leaf development | LOCATED IN: intracellular | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, PHD-type , BRCT | BEST Arabidopsis thaliana protein match is: breast cancer susceptibility1 Spenn-ch09 - View
Solanum pennellii Sopen09g033130 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400017219 Pentatricopeptide repeat-containing protein ST4.03ch09 + View
Trochodendron aralioides TAR362G1132 group17 + View
Tarenaya hassleriana THA.LOC104808631 putative pentatricopeptide repeat-containing protein At3g23330 NW_010964923.1 + View
Tripterygium wilfordii TWI09G1242 NC_052245.1 - View
Vaccinium macrocarpon vmacro08499 Similar to PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro14807 Similar to BARD1: BRCA1-associated RING domain protein 1 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro15347 Similar to LOI1: Pentatricopeptide repeat-containing protein At4g14850 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01027839001 chr5 + View
Zea mays Zm00001eb061240 Zm00001e006036 Pentatricopeptide repeat-containing protein 1 + View
Zea mays Zm00001eb135310 Zm00001e124901 Pentatricopeptide repeat-containing protein 3 - View