Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sp5g23130 PTHR10593//PTHR10593:SF43 - SERINE/THREONINE-PROTEIN KINASE RIO // SHOOT GRAVITROPISM5-LIKE PROTEIN ch5-6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G9290 LG-7 - View
Arabidopsis lyrata AL1G40110 scaffold_1 - View
Arabidopsis lyrata AL2G26780 scaffold_2 - View
Avicennia marina MSTRG.13656 ScioBoG_18778_HRSCAF_18863 + View
Arabidopsis thaliana AT1G25250 indeterminate(ID)-domain 16 indeterminate(ID)-domain 16 (IDD16)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 14 (TAIR:AT1G68130.1)%3B Has 32987 Blast hits to 15964 proteins in 303 species: Archae - 1%3B Bacteria - 31%3B Metazoa - 31048%3B Fungi - 164%3B Plants - 739%3B Viruses - 10%3B Other Eukaryotes - 994 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G68130 indeterminate(ID)-domain 14 Encodes the longer of two splice variants of a transcription factor involved in regulating starch metabolims in response to cold. indeterminate(ID)-domain 14 (IDD14)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: indeterminate(ID)-domain 16 (TAIR:AT1G25250.1)%3B Has 34626 Blast hits to 17187 proteins in 314 species: Archae - 1%3B Bacteria - 0%3B Metazoa - 32617%3B Fungi - 232%3B Plants - 764%3B Viruses - 1%3B Other Eukaryotes - 1011 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB03g12040 ChrB03 - View
Brassica carinata BcaC05g26692 ChrC05 - View
Brassica carinata BcaC01g01673 ChrC01 + View
Brassica carinata BcaB03g15122 ChrB03 - View
Brassica carinata BcaC05g26487 ChrC05 - View
Brassica carinata BcaB03g15401 ChrB03 + View
Brassica carinata BcaC08g45995 ChrC08 - View
Brassica carinata BcaC08g46239 ChrC08 + View
Brassica napus A09p39080 A09 + View
Brassica napus A08p26800 A08 + View
Brassica napus A07p32150 A07 - View
Brassica napus C03p73150 C03 - View
Brassica napus A07p34600 A07 + View
Brassica napus C06p41910 C06 - View
Brassica napus C06p37920 C06 - View
Brassica napus C05p25350 C05 - View
Brassica oleracea BolC6t39241H C6 + View
Brassica oleracea BolC3t19611H C3 - View
Brassica oleracea BolC5t31270H C5 - View
Brassica oleracea BolC6t38891H C6 - View
Brassica rapa BraA09t39408Z A09 + View
Brassica rapa BraA07t30845Z A07 - View
Brassica rapa BraA08t34626Z A08 + View
Brassica rapa BraA07t31078Z A07 + View
Cannabis sativa CANSAT78G1491 NC_044376.1 - View
Citrus clementina Ciclev10015315m.g scaffold_2 - View
Cardamine hirsuta CARHR026310 Zinc finger protein Chr1 - View
Cardamine hirsuta CARHR060800 Zinc finger protein Chr2 + View
Capsella rubella Carub.0001s2532 PTHR10593//PTHR10593:SF43 - SERINE/THREONINE-PROTEIN KINASE RIO // SHOOT GRAVITROPISM5-LIKE PROTEIN scaffold_1 - View
Capsella rubella Carub.0002s1461 PTHR10593//PTHR10593:SF35 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED scaffold_2 + View
Davidia involucrata Dinv02298 GWHABJS00000008 - View
Eutrema salsugineum Thhalv10018614m.g PTHR10593:SF43 - SHOOT GRAVITROPISM5-LIKE PROTEIN scaffold_9 - View
Eutrema salsugineum Thhalv10009376m.g PTHR10593//PTHR10593:SF35 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED scaffold_5 + View
Gossypium hirsutum Gohir.A03G113400 PTHR10593//PTHR10593:SF43 - SERINE/THREONINE-PROTEIN KINASE RIO // SHOOT GRAVITROPISM5-LIKE PROTEIN A03 + View
Manihot esculenta Manes.15G139200 Chromosome15 + View
Papaver somniferum PSO210G1847 NC_039359.1 + View
Populus trichocarpa Potri.008G140400 PTHR34946//PTHR34946:SF2 - FAMILY NOT NAMED // PROTEIN SHOOT GRAVITROPISM 5 Chr08 + View
Quercus lobata QL03p039252 3 + View
Salix brachista Sabra08G0106400 GWHAAZH00000008 + View
Tarenaya hassleriana THA.LOC104807938 protein indeterminate-domain 14-like NW_010960187.1 + View
Tripterygium wilfordii TWI53G1503 NC_052244.1 + View
Utricularia gibba unitig_27.g25297 unitig_27 - View
Vitis vinifera GSVIVG01011587001 chr1 + View