Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sp4g14050 PTHR13793//PTHR13793:SF100 - PHD FINGER PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED ch4-6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G5330 LG-5 + View
Aethionema arabicum Aa31LG1G8510 LG-1 - View
Arabidopsis lyrata AL1G15760 scaffold_1 + View
Arabidopsis lyrata AL4G26890 scaffold_4 - View
Arabidopsis thaliana AT1G05830 trithorax-like protein 2 Encodes a homolog of trithorax%2C a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4%2C ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1. trithorax-like protein 2 (ATX2)%3B FUNCTIONS IN: histone methyltransferase activity (H3-K4 specific)%2C DNA binding%3B INVOLVED IN: histone H3-K4 methylation%2C regulation of transcription%2C DNA-dependent%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: stigma%2C rosette leaf%2C male gametophyte%2C root%3B CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C FY-rich%2C C-terminal (InterPro:IPR003889)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C FY-rich%2C N-terminal (InterPro:IPR003888)%2C Post-SET domain (InterPro:IPR003616)%2C FY-rich%2C C-terminal subgroup (InterPro:IPR018516)%2C PWWP (InterPro:IPR000313)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C FY-rich%2C N-terminal subgroup (InterPro:IPR018518)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1)%3B Has 7263 Blast hits to 7069 proteins in 482 species: Archae - 2%3B Bacteria - 419%3B Metazoa - 3302%3B Fungi - 848%3B Plants - 1335%3B Viruses - 0%3B Other Eukaryotes - 1357 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT2G31650 homologue of trithorax Encodes a homolog of trithorax%2C a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in the formation%2C placement%2C and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm%2C plasma membrane and nuclei%2C shifting to nuclei in the presence of PI5P. homologue of trithorax (ATX1)%3B CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214)%2C Zinc finger%2C PHD-type%2C conserved site (InterPro:IPR019786)%2C Zinc finger%2C PHD-type (InterPro:IPR001965)%2C FY-rich%2C C-terminal (InterPro:IPR003889)%2C Post-SET domain (InterPro:IPR003616)%2C FY-rich%2C N-terminal (InterPro:IPR003888)%2C Protein kinase C-like%2C phorbol ester/diacylglycerol binding (InterPro:IPR002219)%2C Lamin-B receptor of TUDOR domain (InterPro:IPR019023)%2C FY-rich%2C C-terminal subgroup (InterPro:IPR018516)%2C Zinc finger%2C FYVE/PHD-type (InterPro:IPR011011)%2C PWWP (InterPro:IPR000313)%2C FY-rich%2C N-terminal subgroup (InterPro:IPR018518)%2C Zinc finger%2C PHD-finger (InterPro:IPR019787)%3B BEST Arabidopsis thaliana protein match is: trithorax-like protein 2 (TAIR:AT1G05830.2)%3B Has 7192 Blast hits to 6948 proteins in 474 species: Archae - 2%3B Bacteria - 393%3B Metazoa - 3480%3B Fungi - 840%3B Plants - 1251%3B Viruses - 0%3B Other Eukaryotes - 1226 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC07g42107 ChrC07 - View
Brassica carinata BcaB06g28533 ChrB06 + View
Brassica napus A04p24160 A04 + View
Brassica napus A09p67280 A09 - View
Brassica napus C08p51570 C08 - View
Brassica oleracea BolC8t52685H C8 - View
Brassica oleracea BolC4t27580H C4 + View
Brassica rapa BraA04t17936Z A04 + View
Cardamine hirsuta CARHR005360 Histone-lysine N-methyltransferase-like protein Chr1 + View
Cardamine hirsuta CARHR125270 Histone-lysine N-methyltransferase-like protein Chr4 - View
Capsella rubella Carub.0001s0518 PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED scaffold_1 + View
Capsella rubella Carub.0004s1295 PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED scaffold_4 - View
Erythranthe guttata Migut.N00443 scaffold_14 + View
Eutrema salsugineum Thhalv10006646m.g PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10016217m.g PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED scaffold_10 - View
Fragaria x ananassa FAN12G2369 PF00856//PF05965//PF13771//PF13831 - SET domain (SET) // F/Y rich C-terminus (FYRC) // PHD-like zinc-binding domain (zf-HC5HC2H) // PHD-finger (PHD_2) Fvb4-3 + View
Fragaria vesca FvH4_4g12210 PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED Fvb4 + View
Gossypium hirsutum Gohir.D10G130300 PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED D10 - View
Gossypium hirsutum Gohir.A10G136500 PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED A10 - View
Gossypium raimondii Gorai.011G144000 Chr11 - View
Trochodendron aralioides TAR362G0932 group17 - View
Theobroma cacao Thecc.04G180700 Trithorax-like protein 2 Chromosome_4 - View
Tarenaya hassleriana THA.LOC104800910 histone-lysine N-methyltransferase ATX2 isoform X1 NW_010969548.1 - View