Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen01g003930 MATE efflux family protein | FUNCTIONS IN: antiporter activity, drug transmembrane transporter activity | INVOLVED IN: drug transmembrane transport, transmembrane transport | LOCATED IN: membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE | BEST Arabidopsis thaliana protein match is: MATE efflux family protein Spenn-ch01 + View
Sopen01g034210 Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells. | FERRIC REDUCTASE DEFECTIVE 3 (FRD3) | CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE | BEST Arabidopsis thaliana protein match is: MATE efflux family protein Spenn-ch01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G3510 LG-10 + View
Acer truncatum Atru.chr3.2724 chr3 - View
Actinidia chinensis Actinidia16333 Lachesis_group24 + View
Arabidopsis lyrata AL1G59150 scaffold_1 + View
Avicennia marina MSTRG.18425 ScioBoG_22153_HRSCAF_22259 + View
Amaranthus hybridus Ah.06g194240 Protein DETOXIFICATION 42 (AtDTX42) (Aluminum-activated citrate transporter) (AtMATE) (FRD-like protein) (Multidrug and toxic compound extrusion protein 42) (MATE protein 42) AmaHy_arrow1_Scaffold_6 - View
Arabidopsis thaliana AT1G51340 MATE efflux family protein MATE efflux family protein%3B FUNCTIONS IN: antiporter activity%2C drug transmembrane transporter activity%3B INVOLVED IN: drug transmembrane transport%2C transmembrane transport%3B LOCATED IN: endomembrane system%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528)%3B BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G08040.2)%3B Has 12629 Blast hits to 12566 proteins in 2039 species: Archae - 347%3B Bacteria - 9962%3B Metazoa - 104%3B Fungi - 158%3B Plants - 404%3B Viruses - 0%3B Other Eukaryotes - 1654 (source: NCBI BLink). MATE efflux family protein%3B FUNCTIONS IN: antiporter activity%2C drug transmembrane transporter activity%3B INVOLVED IN: drug transmembrane transport%2C transmembrane transport%3B LOCATED IN: membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528)%3B BEST Arabidopsis thaliana protein match is: MATE efflux family protein (TAIR:AT3G08040.2)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB04g17223 ChrB04 + View
Brassica napus A08p02970 A08 + View
Beta vulgaris EL10Ac4g10255 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0037231 PREDICTED: MATE efflux family protein 1 [Nelumbo nucifera] Chr11 - View
Corylus avellana Haze_23135 Similar to DTX42: Protein DETOXIFICATION 42 (Arabidopsis thaliana OX%3D3702) 6 + View
Corylus avellana Haze_19900 Similar to PCMP-H52: Putative pentatricopeptide repeat-containing protein At5g52630 (Arabidopsis thaliana OX%3D3702) 10 - View
Citrus clementina Ciclev10014936m.g scaffold_2 + View
Carpinus fangiana Cfa009769 Cfa04 + View
Cardamine hirsuta CARHR041410 Mate efflux family protein Chr1 + View
Carya illinoinensis CiPaw.13G161000 PTHR11206//PTHR11206:SF128 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN 1 Chr13 - View
Citrullus lanatus ClCG02G023240 Citrate efflux MATE transporter CG_Chr02 - View
Cucumis melo MELO3C014595.2 Protein DETOXIFICATION chr05 + View
Carica papaya Cpa.g.sc84.57 supercontig_84 - View
Capsella rubella Carub.0001s4020 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 scaffold_1 + View
Cucumis sativus L. CsaV3_4G024250 Protein DETOXIFICATION chr4 + View
Daucus carota DCAR_002071 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv36262 GWHABJS00000007 - View
Durio zibethinus Duzib150G0518 NW_019167882.1 - View
Eucalyptus grandis Eucgr.J00768 Chr10 - View
Erythranthe guttata Migut.D00600 scaffold_4 + View
Eutrema salsugineum Thhalv10011401m.g PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 scaffold_7 - View
Fragaria x ananassa FAN21G3666 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Fvb3-2 - View
Fragaria vesca FvH4_3g28870 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Fvb3 - View
Gossypium hirsutum Gohir.D09G111200 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 D09 - View
Gossypium hirsutum Gohir.A09G114500 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 A09 - View
Glycine max Glyma.11G133900 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Gm11 + View
Glycine max Glyma.15G034600 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Gm15 + View
Gossypium raimondii Gorai.006G128800 Chr06 - View
Lonicera japonica Lj1C331T2 GWHAAZE00000001 + View
Magnolia biondii MBI04_g44512_MAGBIO AED:0.21 Chr04 + View
Malus domestica MD03G1175500 MATE efflux family protein Chr03 - View
Malus domestica MD11G1193400 MATE efflux family protein Chr11 - View
Manihot esculenta Manes.06G164500 Chromosome06 - View
Manihot esculenta Manes.14G002600 Chromosome14 + View
Medicago truncatula Medtr2g097900 aluminum-activated citrate transporter chr2 - View
Nelumbo nucifera Nn2g15380 chr2 - View
Nelumbo nucifera Nn7g36198 chr7 + View
Nicotiana tabacum Nitab4.5_0005819g0050 Multi antimicrobial extrusion protein Nitab4.5_0005819 + View
Petunia axillaris Peaxi162Scf00004g02330 MATE efflux family protein Peaxi162Scf00004 + View
Punica granatum PGR119G2191 NC_045132.1 + View
Prunus persica Prupe.4G248800 Pp04 + View
Populus trichocarpa Potri.009G053700 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Chr09 - View
Phaseolus vulgaris Phvul.011G060000 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Chr11 + View
Phaseolus vulgaris Phvul.007G254800 PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Chr07 + View
Quercus lobata QL01p004738 1 - View
Rosa chinensis RcHm_v2.0_Chr5g0052011 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0221400 chr13 - View
Striga asiatica SGA_v2.0_scaffold8G04591 scaffold8 - View
Salix brachista Sabra09G0039000 GWHAAZH00000009 - View
Salix brachista Sabra16G0056800 GWHAAZH00000016 - View
Simmondsia chinensis Sc09g0000700 GWHAASQ00000009 + View
Sechium edule Sed0026176 LG01 - View
Sapria himalayana SHI29774 scaffold68_2605431 + View
Solanum lycopersicum Solyc01g008420.3 Protein DETOXIFICATION (AHRD V3.3 *** S6BP63_TOBAC) SL4.0ch01 + View
Solanum lycopersicum Solyc11g065820.3 Protein DETOXIFICATION (AHRD V3.3 *** S6BP63_TOBAC) SL4.0ch11 - View
Schrenkiella parvula Sp1g38000 PTHR11206//PTHR11206:SF128 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN 1 ch1-2 + View
Solanum tuberosum PGSC0003DMG400010706 Aluminum-activated citrate transporter ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400007358 Aluminum-activated citrate transporter ST4.03ch11 - View
Trochodendron aralioides TAR633G0164 group2 + View
Theobroma cacao Thecc.09G233100 MATE efflux family protein Chromosome_9 + View
Tripterygium wilfordii TWI32G0658 NC_052254.1 - View
Vaccinium macrocarpon vmacro04156 Similar to DTX42: Protein DETOXIFICATION 42 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1415 CM024071.1 - View
Vigna mungo VMungo1127G0504 CM024076.1 + View
Vitis vinifera GSVIVG01025266001 chr6 + View