Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen11g009180 Pentatricopeptide repeat (PPR-like) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: SLOW GROWTH 1 Spenn-ch11 - View
Sopen03g011150 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch03 + View
Sopen11g021170 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch11 - View
Sopen02g001320 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch02 + View
Sopen07g017190 Pentatricopeptide repeat (PPR-like) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch07 - View
Sopen01g015270 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch01 + View
Sopen04g012430 pentatricopeptide (PPR) repeat-containing protein | Tetratricopeptide repeat (TPR)-like superfamily protein | LOCATED IN: mitochondrion | EXPRESSED IN: root, pedicel | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch04 + View
Sopen07g021720 Pentatricopeptide repeat (PPR-like) superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch07 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.2846 chr3 - View
Acer truncatum Atru.chr1.1046 chr1 + View
Actinidia chinensis Actinidia16320 Lachesis_group24 + View
Avicennia marina MSTRG.16374 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.21379 ScioBoG_26769_HRSCAF_26899 - View
Amaranthus hybridus Ah.06g193740 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial AmaHy_arrow1_Scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RSKR16 K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) arahy.Tifrunner.gnm1.Arahy.16 + View
Beta vulgaris EL10Ac4g10291 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0029351 PREDICTED: ribonuclease 3-like [Nicotiana sylvestris] Chr13 + View
Cannabis sativa CANSAT80G1159 NC_044372.1 + View
Corylus avellana Haze_23211 Similar to PCMP-E14: Pentatricopeptide repeat-containing protein At5g27110 (Arabidopsis thaliana OX%3D3702) 6 - View
Citrus clementina Ciclev10017751m.g scaffold_2 + View
Carya illinoinensis CiPaw.14G120800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr14 - View
Carya illinoinensis CiPaw.13G152100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr13 + View
Citrullus lanatus ClCG02G022650 Pentatricopeptide repeat-containing protein, putative CG_Chr02 - View
Chenopodium quinoa AUR62024410 PCMP-H52: Putative pentatricopeptide repeat-containing protein At5g52630 C_Quinoa_Scaffold_2876 + View
Durio zibethinus Duzib150G0252 NW_019167882.1 - View
Durio zibethinus Duzib168G1057 NW_019168159.1 + View
Durio zibethinus Duzib168G0952 NW_019168159.1 - View
Durio zibethinus Duzib150G0284 NW_019167882.1 - View
Erigeron canadensis ECA236G1474 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA233G5191 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.J00784 Chr10 - View
Erythranthe guttata Migut.G00990 scaffold_7 + View
Erythranthe guttata Migut.J01776 scaffold_10 - View
Gossypium hirsutum Gohir.D09G120300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D09 + View
Glycine max Glyma.19G141800 PF01535//PF13812//PF14432 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm19 - View
Lotus japonicus Lj1g0018282 PF01535//PF13812//PF14432 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) chr1 + View
Lactuca sativa Lsat_1_v5_gn_2_31020 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_2 + View
Malus domestica MD12G1068000 mitochondrial RNAediting factor 1 Chr12 + View
Nelumbo nucifera Nn2g15476 chr2 + View
Nicotiana tabacum Nitab4.5_0002026g0060 Pentatricopeptide repeat, GYF, Tetratricopeptide-like helical Nitab4.5_0002026 + View
Olea europaea Oeu003681.1 chr4 - View
Olea europaea Oeu007470.1 scaffold1273 - View
Oryza sativa ssp. japonica Os08g0500600 Pentatricopeptide repeat domain containing protein. chr08 + View
Petunia axillaris Peaxi162Scf00029g00262 Pentatricopeptide repeat-containing protein Peaxi162Scf00029 - View
Punica granatum PGR004G2514 NC_045131.1 + View
Papaver somniferum PSO017G1824 NC_039362.1 - View
Populus trichocarpa Potri.001G267100 PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) Chr01 + View
Populus trichocarpa Potri.001G019500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr01 + View
Striga asiatica SGA_v2.0_scaffold26G11397 scaffold26 - View
Simmondsia chinensis Sc09g0000620 GWHAASQ00000009 + View
Sechium edule Sed0012749 LG01 - View
Sapria himalayana SHI01998 scaffold3_21451142 + View
Solanum lycopersicum Solyc11g062250.2 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3B9A1_CAPCH) SL4.0ch11 + View
Solanum tuberosum PGSC0003DMG400032493 SAM (And some other nucleotide) binding motif; Methyltransferase small ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400024384 Conserved gene of unknown function ST4.03ch01 - View
Selenicereus undatus Hund07521 Scaffold_33676 - View
Trochodendron aralioides TAR623G0658 group7 - View
Trochodendron aralioides TAR369G0350 group18 - View
Trochodendron aralioides TAR369G0486 group18 - View
Vigna mungo VMungo1383G0532 CM024070.1 - View
Vitis vinifera GSVIVG01031485001 chr6 - View
Vitis vinifera GSVIVG01037258001 chr6 + View
Zea mays Zm00001eb226290 Zm00001e013116 Pentatricopeptide repeat-containing protein 5 + View