Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Sopen06g016940 | hypothetical protein | Spenn-ch06 | + | View |
Sopen01g006930 | hypothetical protein | Spenn-ch01 | - | View |
Sopen04g012830 | hypothetical protein | Spenn-ch04 | + | View |
Sopen01g024110 | hypothetical protein | Spenn-ch01 | + | View |
Sopen05g014210 | hypothetical protein | Spenn-ch05 | - | View |
Sopen06g009380 | hypothetical protein | Spenn-ch06 | - | View |
Sopen08g018120 | hypothetical protein | Spenn-ch08 | - | View |
Sopen07g019820 | hypothetical protein | Spenn-ch07 | + | View |
Sopen02g008620 | hypothetical protein | Spenn-ch02 | - | View |
Sopen12g019130 | hypothetical protein | Spenn-ch12 | + | View |
Sopen01g015540 | hypothetical protein | GAG/POL/ENV polyprotein. | Spenn-ch01 | - | View |
Sopen01g011640 | hypothetical protein | Spenn-ch01 | + | View |
Sopen04g022210 | hypothetical protein | Spenn-ch04 | - | View |
Sopen01g013240 | hypothetical protein | Spenn-ch01 | - | View |
Sopen03g016680 | hypothetical protein | Spenn-ch03 | - | View |
Sopen02g009380 | hypothetical protein | Spenn-ch02 | + | View |
Sopen07g006590 | hypothetical protein | Spenn-ch07 | + | View |
Sopen07g013680 | hypothetical protein | Spenn-ch07 | - | View |
Sopen11g021560 | hypothetical protein | DNA/RNA polymerases superfamily protein. | Spenn-ch11 | - | View |
Sopen10g020400 | hypothetical protein | Spenn-ch10 | + | View |
Sopen10g007000 | hypothetical protein | Spenn-ch10 | + | View |
Sopen02g010480 | hypothetical protein | Spenn-ch02 | + | View |
Sopen10g022770 | hypothetical protein | Spenn-ch10 | + | View |
Sopen00g006350 | unknown protein | Spenn-ch00 | - | View |
Sopen12g010580 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 | Spenn-ch12 | - | View |
Sopen01g007330 | hypothetical protein | Spenn-ch01 | + | View |
Sopen11g019520 | hypothetical protein | Spenn-ch11 | + | View |
Sopen09g023200 | hypothetical protein | Spenn-ch09 | + | View |
Sopen04g009460 | hypothetical protein | Spenn-ch04 | - | View |
Sopen02g007200 | hypothetical protein | Spenn-ch02 | - | View |
Sopen03g020340 | RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Berteros evening primrose), hypothetical protein | GAG/POL/ENV polyprotein. | Spenn-ch03 | - | View |
Sopen09g021250 | hypothetical protein | Spenn-ch09 | + | View |
Sopen11g009630 | RNA-directed DNA polymerase homolog (Reverse transcriptase homolog) - Oenothera bertiana (Berteros evening primrose), hypothetical protein | DNA/RNA polymerases superfamily protein. | Spenn-ch11 | + | View |
Sopen04g008730 | hypothetical protein | DNA/RNA polymerases superfamily protein. | Spenn-ch04 | + | View |
Sopen09g019540 | hypothetical protein | Spenn-ch09 | - | View |
Sopen00g005220 | hypothetical protein | Spenn-ch00 | - | View |
Sopen10g025720 | hypothetical protein | Spenn-ch10 | - | View |
Sopen01g010600 | hypothetical protein | Spenn-ch01 | + | View |
Sopen00g003090 | hypothetical protein | Spenn-ch00 | - | View |
Sopen09g010920 | hypothetical protein | Spenn-ch09 | - | View |
Sopen06g005270 | hypothetical protein | Spenn-ch06 | + | View |
Sopen01g025200 | hypothetical protein | Spenn-ch01 | - | View |
Sopen00g005870 | hypothetical protein | Spenn-ch00 | - | View |
Sopen10g020850 | hypothetical protein | Spenn-ch10 | + | View |
Sopen02g002060 | hypothetical protein | Spenn-ch02 | + | View |
Sopen11g023860 | hypothetical protein | Spenn-ch11 | + | View |
Sopen03g026400 | hypothetical protein | Spenn-ch03 | + | View |
Sopen09g017830 | hypothetical protein | Spenn-ch09 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Cannabis sativa | CANSAT80G0310 | NC_044372.1 | - | View | |
Cannabis sativa | CANSAT01G0796 | NC_044373.1 | - | View | |
Cannabis sativa | CANSAT80G0503 | NC_044372.1 | - | View | |
Chenopodium quinoa | AUR62030162 | Protein of unknown function | C_Quinoa_Scaffold_1747 | - | View |
Erigeron canadensis | ECA233G5947 | Conyza_canadensis_scaffold:1 | + | View | |
Erigeron canadensis | ECA238G3356 | Conyza_canadensis_scaffold:6 | - | View | |
Erigeron canadensis | ECA232G2025 | Conyza_canadensis_scaffold:2 | - | View | |
Erigeron canadensis | ECA246G2574 | Conyza_canadensis_scaffold:8 | - | View | |
Erigeron canadensis | ECA236G2513 | Conyza_canadensis_scaffold:3 | - | View | |
Erigeron canadensis | ECA236G0227 | Conyza_canadensis_scaffold:3 | + | View | |
Erigeron canadensis | ECA246G1640 | Conyza_canadensis_scaffold:8 | + | View | |
Erigeron canadensis | ECA240G1153 | Conyza_canadensis_scaffold:5 | + | View | |
Erigeron canadensis | ECA247G1916 | Conyza_canadensis_scaffold:7 | + | View | |
Erigeron canadensis | ECA232G3224 | Conyza_canadensis_scaffold:2 | + | View | |
Erigeron canadensis | ECA248G3527 | Conyza_canadensis_scaffold:9 | - | View | |
Erigeron canadensis | ECA246G5083 | Conyza_canadensis_scaffold:8 | - | View | |
Erigeron canadensis | ECA238G4169 | Conyza_canadensis_scaffold:6 | + | View | |
Erigeron canadensis | ECA233G2565 | Conyza_canadensis_scaffold:1 | - | View | |
Erigeron canadensis | ECA248G1448 | Conyza_canadensis_scaffold:9 | + | View | |
Erigeron canadensis | ECA236G0576 | Conyza_canadensis_scaffold:3 | - | View | |
Erigeron canadensis | ECA233G5247 | Conyza_canadensis_scaffold:1 | - | View | |
Erigeron canadensis | ECA236G0205 | Conyza_canadensis_scaffold:3 | + | View | |
Erigeron canadensis | ECA246G2806 | Conyza_canadensis_scaffold:8 | - | View | |
Erigeron canadensis | ECA236G0579 | Conyza_canadensis_scaffold:3 | + | View | |
Erigeron canadensis | ECA240G1865 | Conyza_canadensis_scaffold:5 | - | View | |
Erigeron canadensis | ECA240G3821 | Conyza_canadensis_scaffold:5 | - | View | |
Erigeron canadensis | ECA246G2711 | Conyza_canadensis_scaffold:8 | - | View | |
Erigeron canadensis | ECA248G2569 | Conyza_canadensis_scaffold:9 | - | View | |
Olea europaea | Oeu037136.1 | chr11 | + | View | |
Olea europaea | Oeu020947.1 | chr11 | - | View | |
Olea europaea | Oeu055054.1 | chr1 | + | View | |
Papaver somniferum | PSO541G1342 | NC_039363.1 | + | View | |
Papaver somniferum | PSO832G3058 | NC_039367.1 | + | View | |
Sapria himalayana | SHI15434 | scaffold17_11767850 | - | View | |
Sapria himalayana | SHI15371 | scaffold17_11767850 | - | View | |
Sapria himalayana | SHI22599 | scaffold31_7046607 | + | View | |
Sapria himalayana | SHI22549 | scaffold31_7046607 | + | View | |
Sapria himalayana | SHI20010 | scaffold25_7721883 | - | View | |
Sapria himalayana | SHI17410 | scaffold19_10581841 | + | View | |
Solanum tuberosum | PGSC0003DMG400042025 | Integrase core domain containing protein | ST4.03ch11 | - | View |
Solanum tuberosum | PGSC0003DMG400045299 | Integrase core domain containing protein | ST4.03ch11 | + | View |
Solanum tuberosum | PGSC0003DMG400012078 | Pol | ST4.03ch11 | + | View |
Solanum tuberosum | PGSC0003DMG400046530 | Integrase core domain containing protein | ST4.03ch01 | - | View |
Solanum tuberosum | PGSC0003DMG400044672 | Integrase core domain containing protein | ST4.03ch04 | + | View |
Solanum tuberosum | PGSC0003DMG400040605 | Integrase core domain containing protein | ST4.03ch11 | + | View |
Solanum tuberosum | PGSC0003DMG400037916 | Integrase core domain containing protein | ST4.03ch01 | + | View |