Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen02g004900 zinc knuckle (CCHC-type) family protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCHC-type , DEK, C-terminal | BEST Arabidopsis thaliana protein match is: transcriptional coactivator p15 (PC4) family protein (KELP) Spenn-ch02 + View
Sopen12g013190 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch12 + View
Sopen09g014310 hypothetical protein Spenn-ch09 - View
Sopen06g013600 hypothetical protein Spenn-ch06 + View
Sopen03g020840 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch03 + View
Sopen05g024930 Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch05 - View
Sopen07g019210 hypothetical protein Spenn-ch07 + View
Sopen05g013090 hypothetical protein Spenn-ch05 + View
Sopen00g002820 Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch00 - View
Sopen03g013960 hypothetical protein Spenn-ch03 + View
Sopen10g013010 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch10 + View
Sopen02g005290 hypothetical protein Spenn-ch02 + View
Sopen06g007240 hypothetical protein Spenn-ch06 + View
Sopen09g017310 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch09 - View
Sopen03g011280 hypothetical protein Spenn-ch03 - View
Sopen02g009300 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch02 - View
Sopen02g010440 Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch02 - View
Sopen11g013140 hypothetical protein Spenn-ch11 + View
Sopen07g015480 Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch07 - View
Sopen04g016410 hypothetical protein Spenn-ch04 - View
Sopen03g017190 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch03 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Camellia sinensis var. sinensis CSS0022925 hypothetical protein VITISV_037657 [Vitis vinifera] Chr12 + View
Cannabis sativa CANSAT64G2771 NC_044379.1 - View
Cannabis sativa CANSAT25G0905 NC_044370.1 + View
Cicer arietinum L. Ca_03182_v3 Ca_LG1_v3 - View
Citrus clementina Ciclev10024253m.g scaffold_3 - View
Erigeron canadensis ECA240G0478 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA236G2326 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA246G4187 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA247G3093 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA238G0980 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA240G0416 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA247G0859 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA233G4281 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA236G4726 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA238G2749 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA236G0744 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA247G2868 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA238G4776 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA232G4814 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA247G2897 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA248G3369 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA248G2942 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA238G3763 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA232G3561 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA248G1720 Conyza_canadensis_scaffold:9 + View
Fragaria vesca FvH4_6g21292 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED Fvb6 - View
Lotus japonicus Lj4g0019494 PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED chr4 + View
Lotus japonicus Lj2g0020237 PF14227 - gag-polypeptide of LTR copia-type (UBN2_2) chr2 + View
Manihot esculenta Manes.15G179768 Chromosome15 - View
Medicago truncatula Medtr5g028470 hypothetical protein chr5 + View
Papaver somniferum PSO729G0112 NW_020622270.1 - View
Papaver somniferum PSO017G4051 NC_039362.1 + View
Sequoiadendron giganteum SEGI_13024 chr7 + View
Sapria himalayana SHI22908 scaffold34_6262321 - View
Sapria himalayana SHI19839 scaffold25_7721883 - View
Sapria himalayana SHI15113 scaffold17_11767850 - View
Solanum tuberosum PGSC0003DMG400038701 GI24566 ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400018018 Gene of unknown function ST4.03ch10 + View