Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen03g015530 Pentatricopeptide repeat (PPR) superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch03 - View
Sopen06g015210 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch06 - View
Sopen10g006390 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 Spenn-ch10 + View
Sopen06g004140 hypothetical protein Spenn-ch06 + View
Sopen09g024100 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch09 - View
Sopen03g011150 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch03 + View
Sopen07g017190 Pentatricopeptide repeat (PPR-like) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch07 - View
Sopen00g007410 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch00 - View
Sopen02g003370 Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase. | lovastatin insensitive 1 (LOI1) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 + View
Sopen11g021170 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch11 - View
Sopen10g017350 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch10 + View
Sopen03g011980 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | EXPRESSED IN: shoot apex, embryo, sperm cell, flower, seed | EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch03 - View
Sopen01g015270 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch01 + View
Sopen05g018650 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch05 + View
Sopen04g012430 pentatricopeptide (PPR) repeat-containing protein | Tetratricopeptide repeat (TPR)-like superfamily protein | LOCATED IN: mitochondrion | EXPRESSED IN: root, pedicel | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgaris EL10Ac6g14022 PF00226//PF13459 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain (Fer4_15) Chr6_EL10_PGA_scaffold0 + View
Cannabis sativa CANSAT64G0996 NC_044379.1 + View
Erigeron canadensis ECA246G0331 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA247G2265 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G2269 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA234G3696 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA248G2129 Conyza_canadensis_scaffold:9 + View
Magnolia biondii MBI06_g06697_MAGBIO AED:0.41 Chr06 - View
Populus trichocarpa Potri.019G070200 K19355 - mannan endo-1,4-beta-mannosidase (MAN) Chr19 + View
Populus trichocarpa Potri.013G098625 3.2.1.78 - Mannan endo-1,4-beta-mannosidase / Endo-1,4-mannanase Chr13 + View
Sequoiadendron giganteum SEGI_30937 chr4 + View
Sequoiadendron giganteum SEGI_25319 chr5 - View
Sapria himalayana SHI22472 scaffold31_7046607 - View
Solanum lycopersicum Solyc11g043080.3 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *-* A0A2G2ZLS4_CAPAN) SL4.0ch11 - View
Solanum tuberosum PGSC0003DMG400005377 Pentatricopeptide repeat-containing protein, mitochondrial ST4.03ch07 - View