Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen10g014330 hypothetical protein Spenn-ch10 - View
Sopen06g005160 hypothetical protein Spenn-ch06 - View
Sopen12g015800 hypothetical protein Spenn-ch12 + View
Sopen10g006040 hypothetical protein Spenn-ch10 - View
Sopen02g006920 hypothetical protein Spenn-ch02 + View
Sopen01g017910 hypothetical protein Spenn-ch01 + View
Sopen01g016040 hypothetical protein Spenn-ch01 - View
Sopen04g011400 hypothetical protein Spenn-ch04 - View
Sopen12g014820 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Reverse transcriptase (EC 2.7.7.49) | Endonuclease) - Nicotiana tabacum (Common tobacco), Transposon, En/Spm-like, Encodes a cysteine-rich receptor-like protein kinase. | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (CRK8) | FUNCTIONS IN: kinase activity | INVOLVED IN: protein amino acid phosphorylation | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Reverse transcriptase, RNA-dependent DNA polymerase , Serine/threonine-protein kinase domain , Protein of unknown function DUF26 , Serine/threonine-protein kinase-like domain , Serine/threonine-protein kinase, active site , Protein kinase-like domain , Protein kinase, catalytic domain , Tyrosine-protein kinase, catalytic domain | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 Spenn-ch12 - View
Sopen09g019850 hypothetical protein Spenn-ch09 + View
Sopen07g013940 hypothetical protein Spenn-ch07 - View
Sopen07g011270 hypothetical protein Spenn-ch07 + View
Sopen10g026370 hypothetical protein Spenn-ch10 - View
Sopen09g020920 hypothetical protein Spenn-ch09 + View
Sopen09g018620 hypothetical protein Spenn-ch09 + View
Sopen04g016700 hypothetical protein Spenn-ch04 - View
Sopen07g016840 hypothetical protein Spenn-ch07 - View
Sopen01g009930 hypothetical protein Spenn-ch01 + View
Sopen11g023140 hypothetical protein Spenn-ch11 - View
Sopen12g016980 hypothetical protein Spenn-ch12 - View
Sopen07g010790 hypothetical protein Spenn-ch07 + View
Sopen09g024560 Transposon, En/Spm-like, RNAhelicase-like 8 (RH8) | FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding | INVOLVED IN: viral reproduction, virus-host interaction | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , RNA helicase, ATP-dependent, DEAD-box, conserved site , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein Spenn-ch09 + View
Sopen11g015690 hypothetical protein Spenn-ch11 + View
Sopen06g014270 hypothetical protein | DNA/RNA polymerases superfamily protein | CONTAINS InterPro DOMAIN/s: Reverse transcriptase, RNA-dependent DNA polymerase | BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 . Spenn-ch06 - View
Sopen01g027940 hypothetical protein Spenn-ch01 - View
Sopen02g002150 hypothetical protein Spenn-ch02 - View
Sopen03g020070 hypothetical protein Spenn-ch03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgaris EL10Ac6g14014 Chr6_EL10_PGA_scaffold0 - View
Cicer arietinum L. Ca_13637_v3 Ca_LG5_v3 - View
Erigeron canadensis ECA232G3917 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA236G1799 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA248G0444 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA246G1255 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA240G2030 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA234G1533 Conyza_canadensis_scaffold:4 + View
Papaver somniferum PSO832G4442 NC_039367.1 + View
Papaver somniferum PSO339G6471 NC_039366.1 - View
Rhododendron simsii Rhsim01G0072500 chr01 - View
Sapria himalayana SHI22500 scaffold31_7046607 + View
Solanum tuberosum PGSC0003DMG400042791 Transposon protein, CACTA, En/Spm sub-class ST4.03ch11 + View