Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g020300 hypothetical protein Spenn-ch05 - View
Sopen01g021250 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen05g013290 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 + View
Sopen12g013620 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch12 + View
Sopen06g010980 hypothetical protein Spenn-ch06 - View
Sopen10g007730 hypothetical protein Spenn-ch10 + View
Sopen10g026030 hypothetical protein Spenn-ch10 - View
Sopen01g024500 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen03g016020 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch03 + View
Sopen09g016100 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 - View
Sopen10g006460 hypothetical protein Spenn-ch10 - View
Sopen07g016580 hypothetical protein Spenn-ch07 + View
Sopen06g005190 hypothetical protein Spenn-ch06 + View
Sopen05g024150 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch05 - View
Sopen03g020890 hypothetical protein Spenn-ch03 - View
Sopen07g013630 hypothetical protein Spenn-ch07 + View
Sopen09g022950 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 - View
Sopen07g013250 hypothetical protein Spenn-ch07 - View
Sopen09g021380 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 + View
Sopen07g017460 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 + View
Sopen12g018040 Reverse transcriptase, RNA-directed DNA polymerase (reverse transcriptase)-related family protein | CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein Spenn-ch12 - View
Sopen07g017840 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 - View
Sopen02g003940 hypothetical protein Spenn-ch02 + View
Sopen09g015010 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch09 - View
Sopen01g026920 Ribonuclease H-like superfamily protein | FUNCTIONS IN: RNA binding, RNA-directed DNA polymerase activity, nucleic acid binding | INVOLVED IN: RNA-dependent DNA replication | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Polynucleotidyl transferase, ribonuclease H fold , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein Spenn-ch01 + View
Sopen02g008520 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch02 + View
Sopen05g018940 hypothetical protein Spenn-ch05 - View
Sopen04g011470 hypothetical protein Spenn-ch04 + View
Sopen11g024150 hypothetical protein Spenn-ch11 - View
Sopen04g013750 hypothetical protein Spenn-ch04 + View
Sopen02g003120 hypothetical protein Spenn-ch02 + View
Sopen06g010230 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch06 - View
Sopen05g024780 hypothetical protein Spenn-ch05 + View
Sopen06g013900 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch06 + View
Sopen08g016730 hypothetical protein Spenn-ch08 + View
Sopen01g019410 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch01 - View
Sopen04g010340 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch04 + View
Sopen07g014510 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch07 - View
Sopen10g020500 hypothetical protein Spenn-ch10 - View
Sopen11g021130 hypothetical protein Spenn-ch11 + View
Sopen09g011430 DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch09 + View
Sopen07g014830 hypothetical protein Spenn-ch07 + View
Sopen03g011190 hypothetical protein Spenn-ch03 + View
Sopen08g018070 hypothetical protein Spenn-ch08 - View
Sopen06g008070 Reverse transcriptase, DNAse I-like superfamily protein | CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase , RNA-directed DNA polymerase (reverse transcriptase), related | BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein Spenn-ch06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Beta vulgaris EL10Ac6g13827 PTHR31286:SF2 - TA11-LIKE NON-LTR RETROELEMENT PROTEIN-RELATED Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G1250 NC_044373.1 - View
Erigeron canadensis ECA233G0347 Conyza_canadensis_scaffold:1 - View
Erigeron canadensis ECA238G0330 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA246G2155 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA247G3627 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA247G3056 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA238G2985 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA232G3375 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA247G0874 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA248G1513 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA238G0342 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA240G0545 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA240G1800 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA236G1654 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA247G0264 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA248G0835 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA236G0655 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA232G4122 Conyza_canadensis_scaffold:2 + View
Manihot esculenta Manes.18G112320 Chromosome18 + View
Manihot esculenta Manes.02G201524 Chromosome02 + View
Papaver somniferum PSO170G4440 NC_039360.1 + View
Papaver somniferum PSO832G3943 NC_039367.1 - View
Rhododendron simsii Rhsim01G0069100 chr01 + View
Sequoiadendron giganteum SEGI_33835 chr4 + View
Sequoiadendron giganteum SEGI_11994 chr5 - View
Sequoiadendron giganteum SEGI_31673 chr1 - View
Sapria himalayana SHI01923 scaffold3_21451142 - View
Sapria himalayana SHI03541 scaffold5_19632047 - View
Sapria himalayana SHI21174 scaffold37_5694058 - View
Sapria himalayana SHI26200 scaffold42_4718812 - View
Sapria himalayana SHI11761 scaffold12_13443846 + View
Solanum tuberosum PGSC0003DMG400036240 Reverse transcriptase ST4.03ch09 - View
Solanum tuberosum PGSC0003DMG400040624 Gene of unknown function ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400037470 Non-LTR retroelement reverse transcriptase ST4.03ch02 - View