Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Sopen06g004290 | Vps51/Vps67 family (components of vesicular transport) protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Vps51/Vps67 . | Spenn-ch06 | + | View |
Sopen00g004580 | MINICHROMOSOME MAINTENANCE 6 (MCM6) | FUNCTIONS IN: DNA-dependent ATPase activity, DNA binding, ATP binding | INVOLVED IN: cell proliferation, DNA-dependent DNA replication initiation, DNA unwinding involved in replication | LOCATED IN: nuclear chromatin | EXPRESSED IN: shoot apex | EXPRESSED DURING: IL.00 inflorescence just visible | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like , Nucleic acid-binding, OB-fold , DNA-dependent ATPase MCM , DNA-dependent ATPase MCM, conserved site , MCM protein 6 | BEST Arabidopsis thaliana protein match is: Minichromosome maintenance (MCM2/3/5) family protein | Spenn-ch00 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia30574 | Lachesis_group10 | - | View | |
Avicennia marina | MSTRG.8063 | ScioBoG_102841_HRSCAF_103114 | + | View | |
Capsicum annuum | CAN.G624.12 | PGAv.1.6.scaffold624 | + | View | |
Corylus avellana | Haze_12528 | Similar to MCM2: DNA replication licensing factor MCM2 (Oryza sativa subsp. japonica OX%3D39947) | 9 | + | View |
Ceratophyllum demersum | CDE05G0767 | 3 | - | View | |
Davidia involucrata | Dinv06935 | GWHABJS00000008 | - | View | |
Fragaria x ananassa | FAN12G2733 | K02540 - DNA replication licensing factor MCM2 (MCM2) | Fvb4-3 | + | View |
Fragaria x ananassa | FAN17G1841 | PTHR11630//PTHR11630:SF44 - DNA REPLICATION LICENSING FACTOR // DNA REPLICATION LICENSING FACTOR MCM2 | Fvb4-2 | + | View |
Fragaria vesca | FvH4_4g22180 | K02540 - DNA replication licensing factor MCM2 (MCM2) | Fvb4 | - | View |
Malus domestica | MD16G1144700 | minichromosome maintenance (MCM2/3/5) family protein | Chr16 | + | View |
Nicotiana tabacum | Nitab4.5_0002113g0010 | MCM N-terminal domain, DNA replication licensing factor Mcm2, Nucleic acid-binding, OB-fold, Mini-chromosome maintenance, DNA-dependent ATPase, SNARE associated Golgi protein, Mini-chromosome maintenance, conserved site, P-loop containing nucleoside triphosphate hydrolase | Nitab4.5_0002113 | + | View |
Prunus persica | Prupe.1G211500 | K02540 - DNA replication licensing factor MCM2 (MCM2) | Pp01 | - | View |
Populus trichocarpa | Potri.001G070500 | K02540 - DNA replication licensing factor MCM2 (MCM2) | Chr01 | + | View |
Rosa chinensis | RcHm_v2.0_Chr4g0428411 | RcHm_v2.0_Chr4 | - | View | |
Salvia bowleyana | SalBow2G1437 | GWHASIU00000007 | + | View | |
Salix brachista | Sabra01G0049500 | GWHAAZH00000001 | + | View | |
Sechium edule | Sed0006329 | LG02 | - | View | |
Sapria himalayana | SHI12574 | scaffold11_13529635 | - | View | |
Solanum lycopersicum | Solyc11g040120.3 | DNA helicase (AHRD V3.3 *** A0A2G2X978_CAPBA) | SL4.0ch11 | - | View |
Solanum tuberosum | PGSC0003DMG400002190 | Minichromosome maintenance factor | ST4.03ch11 | - | View |
Tripterygium wilfordii | TWI18G1079 | NC_052241.1 | + | View | |
Vitis vinifera | GSVIVG01001119001 | chr1 | + | View |