Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen07g006300 Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B) | CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 , Zinc finger, FYVE-type , Zinc finger, FYVE-related , Zinc finger, FYVE/PHD-type , Phosphatidylinositol-4-phosphate 5-kinase, core | BEST Arabidopsis thaliana protein match is: 1-phosphatidylinositol-4-phosphate 5-kinases, zinc ion binding, 1-phosphatidylinositol-3-phosphate 5-kinases Spenn-ch07 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G8370 LG-6 + View
Acer truncatum Atru.chr13.1873 chr13 - View
Arabidopsis lyrata AL1G48840 scaffold_1 + View
Avicennia marina MSTRG.1492 ScioBoG_102833_HRSCAF_103052 + View
Amaranthus hybridus Ah.05g172800 Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D (Phosphatidylinositol 3-phosphate 5-kinase) (EC 2.7.1.150) (Phosphatidylinositol 3-phosphate 5-kinase type III) (PIPkin-III) (Type III PIP kinase) (Protein FORMS APLOID AND BINUCLEATE CELLS 1D) AmaHy_arrow1_Scaffold_5 + View
Aquilegia oxysepala Aqoxy5G02508 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P9DCQH PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CMW9FP PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT1G34260 FORMS APLOID AND BINUCLEATE CELLS 1A Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase%2C but%2C because it lacks a FYVE domain%2C it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore%2C its molecular function remains unknown. FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D)%3B FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity%2C phosphatidylinositol phosphate kinase activity%2C ATP binding%3B INVOLVED IN: phosphatidylinositol metabolic process%2C cellular protein metabolic process%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Phosphatidylinositol-4-phosphate 5-kinase%2C core (InterPro:IPR002498)%3B BEST Arabidopsis thaliana protein match is: FORMS APLOID AND BINUCLEATE CELLS 1C (TAIR:AT1G71010.1)%3B Has 3115 Blast hits to 2757 proteins in 368 species: Archae - 419%3B Bacteria - 0%3B Metazoa - 983%3B Fungi - 610%3B Plants - 538%3B Viruses - 0%3B Other Eukaryotes - 565 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC08g43792 ChrC08 - View
Brassica carinata BcaB07g33143 ChrB07 - View
Brassica napus A09p32180 A09 - View
Brassica oleracea BolC6t36302H C6 - View
Brassica rapa BraA09t38764Z A09 - View
Beta vulgaris EL10Ac1g00052 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0012250 PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Vitis vinifera] Chr4 - View
Citrus clementina Ciclev10000021m.g scaffold_5 - View
Cardamine hirsuta CARHR033750 Phosphatidylinositol-4-phosphate 5-kinase family protein Chr1 + View
Chenopodium quinoa AUR62023597 FAB1D: Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D C_Quinoa_Scaffold_1606 - View
Chenopodium quinoa AUR62004679 FAB1D: Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D C_Quinoa_Scaffold_4250 - View
Capsella rubella Carub.0001s3240 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED scaffold_1 + View
Daucus carota DCAR_023115 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv09571 GWHABJS00000011 - View
Durio zibethinus Duzib177G1160 NW_019168004.1 + View
Eucalyptus grandis Eucgr.F02638 Chr06 - View
Erythranthe guttata Migut.N03335 scaffold_14 + View
Erythranthe guttata Migut.C01203 scaffold_3 + View
Fragaria x ananassa FAN24G0341 PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Fvb2-2 + View
Fragaria x ananassa FAN27G1053 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Fvb2-1 - View
Fragaria x ananassa FAN20G2208 PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Fvb2-3 + View
Fragaria vesca FvH4_2g12440 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Fvb2 - View
Glycine max Glyma.20G173200 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Gm20 + View
Lotus japonicus Lj5g0022851 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED chr5 + View
Manihot esculenta Manes.02G188400 Chromosome02 + View
Manihot esculenta Manes.18G097800 Chromosome18 + View
Medicago truncatula Medtr1g097110 phosphatidylinositol-4-phosphate 5-kinase family protein chr1 - View
Nicotiana tabacum Nitab4.5_0000051g0050 GroEL-like apical domain, Chaperonin Cpn60/TCP-1, Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup, Phosphatidylinositol-4-phosphate 5-kinase, core, Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain, Phosphatidylinositol-4-phosphate 5-kinase, C-terminal, TCP-1-like chaperonin intermediate domain Nitab4.5_0000051 - View
Olea europaea Oeu030020.2 chr14 + View
Prunus persica Prupe.8G050600 PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Pp08 + View
Populus trichocarpa Potri.019G087000 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Chr19 - View
Populus trichocarpa Potri.013G116400 PTHR11353//PTHR11353:SF107 - CHAPERONIN // 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED Chr13 - View
Phaseolus vulgaris Phvul.007G087000 Chr07 + View
Quercus lobata QL02p034792 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0272731 RcHm_v2.0_Chr6 - View
Striga asiatica SGA_v2.0_scaffold118G32447 scaffold118 + View
Salvia bowleyana SalBow6G0379 GWHASIU00000002 - View
Salvia bowleyana SalBow7G2868 GWHASIU00000005 - View
Salix brachista Sabra13G0098600 GWHAAZH00000013 - View
Salix brachista Sabra19G0097400 GWHAAZH00000019 - View
Simmondsia chinensis Sc23g0001000 GWHAASQ00000023 + View
Solanum lycopersicum Solyc06g065540.3 1-phosphatidylinositol-3-phosphate 5-kinase fab1d-like protein (AHRD V3.3 *** A0A2K3NPE5_TRIPR) SL4.0ch06 - View
Solanum lycopersicum Solyc11g013820.2 1-phosphatidylinositol-3-phosphate 5-kinase-like protein (AHRD V3.3 *-* A0A2K3NR77_TRIPR) SL4.0ch11 + View
Schrenkiella parvula Sp1g29490 PTHR11353:SF107 - 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED ch1-1 + View
Selenicereus undatus Hund16812 Scaffold_33675 - View
Selenicereus undatus Hund27067 Scaffold_2055 + View
Trochodendron aralioides TAR381G0541 group11 + View
Trifolium pratense TPR.G30572 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI32G0256 NC_052254.1 + View
Vaccinium macrocarpon vmacro12519 Similar to FAB1D: Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01036852001 chr18 - View