Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g032670 Uncharacterised protein family (UPF0497) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) Spenn-ch05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G12500 LG-2 - View
Acer truncatum Atru.chr1.2338 chr1 - View
Actinidia chinensis Actinidia02296 Lachesis_group20 - View
Actinidia chinensis Actinidia26841 Lachesis_group0 - View
Arabidopsis lyrata AL7G38560 scaffold_7 + View
Avicennia marina MSTRG.14601 ScioBoG_18782_HRSCAF_18867 - View
Avicennia marina MSTRG.7147 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.16040 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.14g087470 CASP-like protein 2B1 (VvCASPL2B1) AmaHy_arrow1_Scaffold_14 - View
Amaranthus hybridus Ah.09g234050 AmaHy_arrow1_Scaffold_9 - View
Aquilegia oxysepala Aqoxy4G02232 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.83Q2SU PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HUVM91 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IMB79D PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CIT971 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT4G16442 Uncharacterized protein family (UPF0497) Uncharacterised protein family (UPF0497)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%2C Uncharacterised protein family UPF0497%2C trans-membrane plant subgroup (InterPro:IPR006459)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT2G35760.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0624G041 AmTr_v1.0_scaffold00028 - View
Brassica carinata BcaC09g50344 ChrC09 - View
Brassica carinata BcaNung00196 Contig74 + View
Brassica napus A01p21150 A01 + View
Brassica napus C01p26420 C01 + View
Brassica napus A03p49820 A03 - View
Brassica oleracea BolC1t02589H C1 + View
Brassica oleracea BolC7t45310H C7 - View
Brassica rapa BraA03t14077Z A03 - View
Brassica rapa BraA01t02025Z A01 + View
Beta vulgaris EL10Ac8g20239 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Chr8_EL10_PGA_scaffold4 + View
Camellia sinensis var. sinensis CSS0018375 RecName: Full=CASP-like protein 2B1; Short=VvCASPL2B1 [Vitis vinifera] Chr8 - View
Camellia sinensis var. sinensis CSS0010026 RecName: Full=CASP-like protein 2B1; Short=VvCASPL2B1 [Vitis vinifera] Chr8 - View
Cannabis sativa CANSAT56G1351 NC_044371.1 - View
Cicer arietinum L. Ca_00745_v3 Ca_LG1_v3 + View
Corylus avellana Haze_06978 Similar to POPTRDRAFT_818956: CASP-like protein 2B2 (Populus trichocarpa OX%3D3694) 2 + View
Coffea canephora Cc09_g00610 CASP-like protein GSVIVT00013502001 chr9 - View
Citrus clementina Ciclev10016754m.g scaffold_2 + View
Carpinus fangiana Cfa000068 Cfa01 - View
Cardamine hirsuta CARHR222810 CASP-like protein Chr7 - View
Carya illinoinensis CiPaw.09G105600 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.10G079800 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Chr10 + View
Citrullus lanatus ClCG01G010680 CASP-like protein CG_Chr01 + View
Cucumis melo MELO3C025536.2 CASP-like protein chr12 + View
Chenopodium quinoa AUR62021829 GSVIVT00013502001: CASP-like protein 2B1 C_Quinoa_Scaffold_1862 - View
Chenopodium quinoa AUR62012828 GSVIVT00013502001: CASP-like protein 2B1 C_Quinoa_Scaffold_2715 + View
Capsella rubella Carub.0007s2508 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED scaffold_7 + View
Cucumis sativus L. CsaV3_UNG057470 CASP-like protein scaffold92 + View
Cucumis sativus L. CsaV3_1G015820 CASP-like protein chr1 - View
Daucus carota DCAR_002233 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_030856 hypothetical protein DCARv2_Chr9 - View
Davidia involucrata Dinv19877 GWHABJS00000016 - View
Davidia involucrata Dinv04409 GWHABJS00000002 + View
Durio zibethinus Duzib235G0826 NW_019167982.1 + View
Durio zibethinus Duzib192G0830 NW_019168037.1 - View
Eucalyptus grandis Eucgr.D01440 Chr04 + View
Erythranthe guttata Migut.H01620 scaffold_8 + View
Erythranthe guttata Migut.M01427 scaffold_13 + View
Eutrema salsugineum Thhalv10026264m.g PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED scaffold_1 + View
Fragaria x ananassa FAN21G2187 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria x ananassa FAN25G2605 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Fvb3-1 - View
Fragaria vesca FvH4_3g00580 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Fvb3 + View
Gossypium hirsutum Gohir.A06G155300 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED A06 + View
Gossypium hirsutum Gohir.D10G008200 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED D10 - View
Gossypium hirsutum Gohir.D06G161700 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED D06 + View
Gossypium hirsutum Gohir.A10G008400 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED A10 - View
Glycine max Glyma.17G007400 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Gm17 - View
Glycine max Glyma.09G012200 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Gm09 + View
Glycine max Glyma.15G116800 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Gm15 + View
Glycine max Glyma.07G266800 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Gm07 + View
Gossypium raimondii Gorai.010G188700 Chr10 + View
Gossypium raimondii Gorai.011G008900 Chr11 - View
Helianthus annuus HanXRQChr16g0516411 Probable CASP-like protein 2B1 HanXRQChr16 + View
Lupinus albus Lalb_Chr18g0057121 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Lalb_Chr18 + View
Lupinus albus Lalb_Chr15g0088091 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Lalb_Chr15 + View
Lupinus albus Lalb_Chr20g0119401 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Lalb_Chr20 + View
Lotus japonicus Lj6g0005556 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED chr6 + View
Lonicera japonica Lj2C259T6 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_4_63540 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_7_14141 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_7 - View
Malus domestica MD10G1336500 Uncharacterised protein family (UPF0497) Chr10 - View
Manihot esculenta Manes.08G070700 Chromosome08 - View
Manihot esculenta Manes.09G081900 Chromosome09 + View
Medicago truncatula Medtr2g026530 CASP POPTRDRAFT-like protein chr2 + View
Nelumbo nucifera Nn1g07471 chr1 + View
Nelumbo nucifera Nn1g03226 chr1 - View
Nicotiana tabacum Nitab4.5_0002499g0010 Uncharacterised protein family UPF0497, trans-membrane plant subgroup, Uncharacterised protein family UPF0497, trans-membrane plant Nitab4.5_0002499 - View
Olea europaea Oeu057038.1 chr6 + View
Olea europaea Oeu052855.1 chr13 - View
Punica granatum PGR004G0703 NC_045131.1 + View
Prunus persica Prupe.4G007000 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Pp04 + View
Pisum sativum Psat1g173800 Domain of unknown function (DUF588) chr1LG6 - View
Papaver somniferum PSO541G5294 NC_039363.1 + View
Papaver somniferum PSO675G9179 NC_039358.1 - View
Populus trichocarpa Potri.006G016900 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Chr06 + View
Populus trichocarpa Potri.016G008800 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Chr16 - View
Phaseolus vulgaris Phvul.006G141200 Chr06 - View
Phaseolus vulgaris Phvul.003G085300 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Chr03 + View
Quercus lobata QL05p068341 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0000791 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0143000 chr13 - View
Striga asiatica SGA_v2.0_scaffold89G27527 scaffold89 + View
Striga asiatica SGA_v2.0_scaffold7G03716 scaffold7 - View
Salvia bowleyana SalBow8G2952 GWHASIU00000004 - View
Salix brachista Sabra06G0012000 GWHAAZH00000006 + View
Salix brachista Sabra16G0013100 GWHAAZH00000016 - View
Simmondsia chinensis Sc17g0007960 GWHAASQ00000017 + View
Sechium edule Sed0023330 LG08 - View
Solanum lycopersicum Solyc11g012590.3 CASP-like protein (AHRD V3.3 *** A0A328E4A6_9ASTE) SL4.0ch11 + View
Schrenkiella parvula Sp7g14980 PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED ch7-4 - View
Solanum tuberosum PGSC0003DMG400013293 UPF0497 membrane protein 14 ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400008455 UPF0497 membrane protein 12 ST4.03ch05 + View
Selenicereus undatus Hund21140 Scaffold_33680 - View
Trochodendron aralioides TAR627G0286 group6 + View
Trochodendron aralioides TAR629G1247 group0 - View
Theobroma cacao Thecc.06G237000 CASP-like protein POPTRDRAFT_818956 Chromosome_6 + View
Trifolium pratense TPR.G10562 Tp57577_TGAC_v2_scaf_215 - View
Tripterygium wilfordii TWI38G1818 NC_052252.1 - View
Tripterygium wilfordii TWI63G1153 NC_052240.1 - View
Utricularia gibba unitig_748.g7609 unitig_748 + View
Vaccinium macrocarpon vmacro03627 Similar to GSVIVT00013502001: CASP-like protein 2B1 (Vitis vinifera OX%3D29760) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0540G2397 CM024075.1 + View