Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g032640 RAB GTPase homolog A5A (RABA5a) | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type , Rab11-related | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D Spenn-ch05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.2359 chr1 - View
Actinidia chinensis Actinidia11891 Lachesis_group6 + View
Actinidia chinensis Actinidia39275 Lachesis_group17 + View
Actinidia chinensis Actinidia26848 Lachesis_group0 - View
Actinidia chinensis Actinidia02305 Lachesis_group20 - View
Arabidopsis lyrata AL8G10450 scaffold_8 + View
Avicennia marina MSTRG.14605 ScioBoG_18782_HRSCAF_18867 - View
Avicennia marina MSTRG.16033 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.7154 ScioBoG_102840_HRSCAF_103099 - View
Arabidopsis thaliana AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A (RABA5a)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%2C Rab11-related (InterPro:IPR015595)%3B BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g31376 ChrC06 + View
Brassica carinata BcaC03g16967 ChrC03 - View
Brassica carinata BcaC04g21621 ChrC04 + View
Brassica carinata BcaC06g34243 ChrC06 + View
Brassica napus C07p31180 C07 - View
Brassica napus A09p23060 A09 - View
Brassica napus C02p48730 C02 - View
Brassica oleracea BolC2t10965H C2 - View
Brassica rapa BraA02t08141Z A02 - View
Brassica rapa BraA09t37910Z A09 - View
Camellia sinensis var. sinensis CSS0023511 unnamed protein product [Coffea canephora] Chr8 - View
Camellia sinensis var. sinensis CSS0010146 Ras-related protein RABA5a [Morus notabilis] Chr8 + View
Capsicum annuum CAN.G696.18 PGAv.1.6.scaffold696 - View
Cannabis sativa CANSAT56G4313 NC_044371.1 - View
Coffea canephora Cc09_g00680 Ras-related protein RABA5a chr9 - View
Citrus clementina Ciclev10017675m.g scaffold_2 + View
Cardamine hirsuta CARHR173830 Ras-related protein Rab-25 Chr6 + View
Carya illinoinensis CiPaw.10G079100 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A Chr10 - View
Citrullus lanatus ClCG01G010600 Pentatricopeptide repeat-containing protein, putative CG_Chr01 + View
Cucumis melo MELO3C025545.2 Pentatricopeptide repeat-containing protein chr12 + View
Corchorus olitorius COL.COLO4_31906 Small GTPase superfamily AWUE01020882.1 + View
Carica papaya Cpa.g.sc27.257 supercontig_27 - View
Capsella rubella Carub.0008s0025 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A scaffold_8 + View
Cucumis sativus L. CsaV3_UNG049340 Ras-related protein like scaffold92 + View
Daucus carota DCAR_002240 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv32067 GWHABJS00000002 + View
Davidia involucrata Dinv05014 GWHABJS00000016 - View
Durio zibethinus Duzib160G0605 NW_019168015.1 + View
Durio zibethinus Duzib235G1382 NW_019167982.1 + View
Durio zibethinus Duzib192G0228 NW_019168037.1 - View
Erigeron canadensis ECA248G0330 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.D01430 Chr04 + View
Eucalyptus grandis Eucgr.E03899 Chr05 + View
Erythranthe guttata Migut.H01615 scaffold_8 + View
Erythranthe guttata Migut.M01416 scaffold_13 + View
Fragaria x ananassa FAN25G2688 PTHR24073//PTHR24073:SF430 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5A Fvb3-1 + View
Fragaria x ananassa FAN21G2817 PTHR24073//PTHR24073:SF430 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5A Fvb3-2 + View
Fragaria vesca FvH4_3g00730 PTHR24073//PTHR24073:SF430 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA5A Fvb3 - View
Gossypium hirsutum Gohir.A06G154500 KOG0079 - GTP-binding protein H-ray, small G protein superfamily A06 + View
Gossypium hirsutum Gohir.D06G161200 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A D06 + View
Gossypium hirsutum Gohir.A10G008500 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A A10 - View
Gossypium hirsutum Gohir.D10G008300 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A D10 - View
Gossypium raimondii Gorai.010G188100 Chr10 + View
Gossypium raimondii Gorai.011G009000 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0657F.1_g197010 Hma1.2p1_0657F.1 - View
Lonicera japonica Lj1C1242T1 GWHAAZE00000001 + View
Lonicera japonica Lj2A260T83 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_4_63440 Lsat_1_v8_lg_4 + View
Magnolia biondii MBI19_g33779_MAGBIO AED:0.04 Chr19 + View
Malus domestica MD10G1335600 RAB GTPase homolog A5A Chr10 + View
Malus domestica MD05G1360000 RAB GTPase homolog A5A Chr05 + View
Nicotiana tabacum Nitab4.5_0003626g0090 Small GTPase superfamily, Rab type, Small GTPase superfamily, Ras type, Small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase, Small GTP-binding protein domain, Ran GTPase, Small GTPase superfamily, Rho type Nitab4.5_0003626 + View
Nicotiana tabacum Nitab4.5_0001735g0130 Small GTPase superfamily, Small GTPase superfamily, Ras type, Small GTPase superfamily, Rab type, Small GTP-binding protein domain, P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, Rho type Nitab4.5_0001735 + View
Nicotiana tabacum Nitab4.5_0000143g0070 Small GTPase superfamily, Ras type, Small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase, Small GTPase superfamily, Rab type, Small GTPase superfamily, Rho type, Small GTP-binding protein domain, Ran GTPase Nitab4.5_0000143 - View
Olea europaea Oeu052870.1 chr13 - View
Petunia axillaris Peaxi162Scf00352g01023 Ras-related protein Rab-11A Peaxi162Scf00352 + View
Punica granatum PGR004G2006 NC_045131.1 + View
Prunus persica Prupe.4G008200 Pp04 - View
Papaver somniferum PSO541G5826 NC_039363.1 - View
Papaver somniferum PSO675G5295 NC_039358.1 + View
Populus trichocarpa Potri.016G010300 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A Chr16 - View
Populus trichocarpa Potri.006G015400 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A Chr06 + View
Quercus lobata QL05p068698 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0000971 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim02G0096800 chr02 - View
Striga asiatica SGA_v2.0_scaffold89G27517 scaffold89 + View
Salvia bowleyana SalBow8G5000 GWHASIU00000004 - View
Salix brachista Sabra16G0013900 GWHAAZH00000016 - View
Salix brachista Sabra06G0011000 GWHAAZH00000006 + View
Sechium edule Sed0006750 LG01 - View
Sechium edule Sed0013709 LG10 - View
Solanum lycopersicum Solyc11g012460.3 Ras-related protein RABA5a (AHRD V3.3 *** A0A2G2Y4I2_CAPAN) SL4.0ch11 + View
Schrenkiella parvula Sp2g12250 PTHR24073:SF430 - RAS-RELATED PROTEIN RABA5A ch2-4 - View
Solanum tuberosum PGSC0003DMG400013287 Guanine nucleotide regulatory protein ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400008457 Guanine nucleotide regulatory protein ST4.03ch05 + View
Theobroma cacao Thecc.06G235400 RAB GTPase A5A Chromosome_6 + View
Tripterygium wilfordii TWI63G1364 NC_052240.1 - View
Tripterygium wilfordii TWI38G2370 NC_052252.1 - View
Utricularia gibba unitig_748.g7604 unitig_748 + View
Vaccinium macrocarpon vmacro15755 Similar to RABA5A: Ras-related protein RABA5a (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View