Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen04g006360 Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters. | GL2-EXPRESSION MODULATOR (GEM) | CONTAINS InterPro DOMAIN/s: GRAM | BEST Arabidopsis thaliana protein match is: GRAM domain family protein Spenn-ch04 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G14340 LG-7 - View
Aethionema arabicum Aa31LG6G15110 LG-6 - View
Acer truncatum Atru.chr3.1306 chr3 - View
Actinidia chinensis Actinidia30805 Lachesis_group28 - View
Actinidia chinensis Actinidia10362 Lachesis_group26 - View
Arabidopsis lyrata AL4G11980 scaffold_4 + View
Arabidopsis lyrata AL7G12460 scaffold_7 + View
Avicennia marina MSTRG.3748 ScioBoG_102836_HRSCAF_103072 - View
Avicennia marina MSTRG.2591 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.15702 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.05g170580 AmaHy_arrow1_Scaffold_5 + View
Amaranthus hybridus Ah.02g125850 GLABRA2 expression modulator AmaHy_arrow1_Scaffold_2 + View
Amaranthus hybridus Ah.03g141860 AmaHy_arrow1_Scaffold_3 - View
Aquilegia oxysepala Aqoxy6G01469 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0B6IYK PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WCFB28 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XV68DF PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T2XUYC PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F60HC3 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GYF88Q PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT2G22475 GRAM domain family protein Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division%2C patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1%2C a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1)%2C a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters. GL2-EXPRESSION MODULATOR (GEM)%3B CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182)%3B BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT4G40100.1)%3B Has 360 Blast hits to 359 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 359%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT4G40100 GRAM domain family protein Encodes PRSL1 (PP1 regulatory subunit2-like protein1). Functions as a regulatory subunit of PP1 (protein phosphatase 1) and regulates blue light signaling in stomata. GRAM domain family protein%3B CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182)%3B BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1)%3B Has 358 Blast hits to 358 proteins in 24 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 357%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC02g08651 ChrC02 - View
Brassica carinata BcaC07g41066 ChrC07 - View
Brassica napus C04p51680 C04 + View
Brassica napus C08p40660 C08 - View
Brassica napus A04p16980 A04 + View
Brassica oleracea BolC4t26748H C4 + View
Brassica oleracea BolC8t51632H C8 - View
Brassica rapa BraA09t41145Z A09 - View
Brassica rapa BraA04t17328Z A04 + View
Beta vulgaris EL10Ac6g14797 PTHR31969//PTHR31969:SF4 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 1-RELATED Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0046992 FH interacting protein 1 [Theobroma cacao] Chr4 - View
Camellia sinensis var. sinensis CSS0029010 hypothetical protein CISIN_1g028224mg [Citrus sinensis] Chr1 - View
Capsicum annuum CAN.G1388.5 PGAv.1.6.scaffold1388 + View
Capsicum annuum CAN.G525.44 PGAv.1.6.scaffold525 - View
Cannabis sativa CANSAT01G3014 NC_044373.1 + View
Corylus avellana Haze_15048 Similar to GEM: GLABRA2 expression modulator (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc10_g15530 GEM-like protein 1 chr10 + View
Coffea canephora Cc07_g14360 GLABRA2 expression modulator chr7 - View
Citrus clementina Ciclev10026092m.g scaffold_7 - View
Citrus clementina Ciclev10002139m.g scaffold_5 - View
Ceratophyllum demersum CDE10G0613 8 + View
Ceratophyllum demersum CDE03G0438 12 - View
Ceratophyllum demersum CDE06G2165 4 + View
Carpinus fangiana Cfa004360 Cfa01 - View
Carpinus fangiana Cfa013706 Cfa05 - View
Cardamine hirsuta CARHR113670 GRAM domain-containing protein / ABA-responsive protein-related Chr4 + View
Carya illinoinensis CiPaw.02G021900 PTHR31969//PTHR31969:SF4 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 1-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G047600 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Chr01 - View
Carya illinoinensis CiPaw.08G053700 PTHR31969//PTHR31969:SF4 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 1-RELATED Chr08 + View
Citrullus lanatus ClCG01G018500 GRAM domain-containing protein / ABA-responsive protein-related LENGTH=280 CG_Chr01 - View
Citrullus lanatus ClCG08G011460 GRAM-containing/ABA-responsive protein CG_Chr08 + View
Cucumis melo MELO3C007728.2 GLABRA2 expression modulator chr08 - View
Cucumis melo MELO3C011063.2 GEM-like protein 1 chr03 - View
Corchorus olitorius COL.COLO4_27334 hypothetical protein AWUE01019531.1 + View
Carica papaya Cpa.g.sc36.205 supercontig_36 + View
Carica papaya Cpa.g.sc55.55 supercontig_55 - View
Chenopodium quinoa AUR62027184 GEM: GLABRA2 expression modulator C_Quinoa_Scaffold_2924 - View
Chenopodium quinoa AUR62019005 GEM: GLABRA2 expression modulator C_Quinoa_Scaffold_3876 + View
Chenopodium quinoa AUR62027847 FIP1: GEM-like protein 1 C_Quinoa_Scaffold_3784 + View
Chenopodium quinoa AUR62003283 GEM: GLABRA2 expression modulator C_Quinoa_Scaffold_1000 + View
Capsella rubella Carub.0007s0209 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_2G030050 GLABRA2 expression modulator chr2 + View
Cucumis sativus L. CsaV3_6G045150 GLABRA2 expression modulator-like chr6 - View
Daucus carota DCAR_003456 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_014195 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv13629 GWHABJS00000014 - View
Davidia involucrata Dinv44832 GWHABJS00000002 + View
Davidia involucrata Dinv20784 GWHABJS00000021 - View
Durio zibethinus Duzib093G0461 NW_019167937.1 + View
Durio zibethinus Duzib116G0611 NW_019167949.1 - View
Durio zibethinus Duzib264G1196 NW_019167960.1 + View
Erigeron canadensis ECA247G2470 Conyza_canadensis_scaffold:7 + View
Erigeron canadensis ECA232G4902 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.F00402 Chr06 - View
Eucalyptus grandis Eucgr.F02124 Chr06 - View
Erythranthe guttata Migut.L00169 scaffold_12 + View
Erythranthe guttata Migut.H02316 scaffold_8 - View
Erythranthe guttata Migut.N02864 scaffold_14 + View
Eutrema salsugineum Thhalv10025890m.g PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED scaffold_1 + View
Eutrema salsugineum Thhalv10000257m.g PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED scaffold_15 + View
Fragaria x ananassa FAN08G1845 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Fvb5-3 + View
Fragaria x ananassa FAN26G0821 PTHR31969//PTHR31969:SF4 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 1-RELATED Fvb1-2 - View
Fragaria x ananassa FAN28G1535 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Fvb1-1 + View
Fragaria x ananassa FAN23G0244 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Fvb1-3 - View
Fragaria x ananassa FAN04G3117 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Fvb5-4 - View
Fragaria vesca FvH4_1g20050 PTHR31969//PTHR31969:SF4 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 1-RELATED Fvb1 - View
Gossypium hirsutum Gohir.A11G050900 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED A11 - View
Gossypium hirsutum Gohir.A10G087700 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED A10 + View
Gossypium hirsutum Gohir.D05G224500 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED D05 - View
Gossypium hirsutum Gohir.D12G081300 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED D12 - View
Gossypium hirsutum Gohir.D10G100500 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED D10 - View
Gossypium hirsutum Gohir.A02G130700 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED A02 + View
Gossypium hirsutum Gohir.D11G217900 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED D11 - View
Gossypium hirsutum Gohir.A11G205400 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED A11 + View
Gossypium hirsutum Gohir.D03G041900 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED D03 + View
Gossypium hirsutum Gohir.D11G054300 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED D11 - View
Gossypium hirsutum Gohir.A05G221700 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED A05 - View
Glycine max Glyma.04G093400 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Gm04 - View
Glycine max Glyma.18G145300 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Gm18 + View
Gossypium raimondii Gorai.007G233900 Chr07 - View
Gossypium raimondii Gorai.008G091900 Chr08 + View
Gossypium raimondii Gorai.007G059400 Chr07 - View
Gossypium raimondii Gorai.011G110200 Chr11 - View
Gossypium raimondii Gorai.009G231900 Chr09 - View
Hydrangea macrophylla Hma1.2p1_0125F.1_g059160 Hma1.2p1_0125F.1 - View
Lupinus albus Lalb_Chr16g0381821 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Lalb_Chr16 - View
Lupinus albus Lalb_Chr08g0242331 PTHR31969//PTHR31969:SF4 - FAMILY NOT NAMED // GEM-LIKE PROTEIN 1-RELATED Lalb_Chr08 + View
Lotus japonicus Lj4g0019223 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED chr4 - View
Lonicera japonica Lj4A272G21 GWHAAZE00000004 - View
Lonicera japonica Lj4A732G45 GWHAAZE00000004 + View
Lonicera japonica Lj4P92T39 GWHAAZE00000004 - View
Lonicera japonica Lj2A537T51 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_9_74261 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_1_2361 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_2_65721 Lsat_1_v8_lg_2 + View
Magnolia biondii MBI02_g18290_MAGBIO AED:0.32 Chr02 + View
Magnolia biondii MBI06_g18791_MAGBIO AED:0.17 Chr06 + View
Malus domestica MD08G1192100 FH interacting protein 1 Chr08 + View
Malus domestica MD15G1316400 GRAM domain family protein Chr15 - View
Malus domestica MD15G1380800 FH interacting protein 1 Chr15 + View
Manihot esculenta Manes.12G128400 Chromosome12 - View
Manihot esculenta Manes.18G061700 Chromosome18 - View
Manihot esculenta Manes.13G098200 Chromosome13 + View
Medicago truncatula Medtr8g069110 GLABRA 2 expression modulator-like protein chr8 - View
Medicago truncatula Medtr3g100750 FH protein interacting protein FIP1, putative chr3 - View
Nelumbo nucifera Nn1g05492 chr1 - View
Nicotiana tabacum Nitab4.5_0000902g0070 GRAM domain Nitab4.5_0000902 + View
Olea europaea Oeu032374.1 chr20 + View
Oryza sativa ssp. japonica Os09g0466300 Similar to FIP1. chr09 + View
Petunia axillaris Peaxi162Scf00447g00091 GRAM domain family protein Peaxi162Scf00447 - View
Petunia axillaris Peaxi162Scf00569g00116 GRAM domain family protein Peaxi162Scf00569 - View
Punica granatum PGR102G2489 NC_045129.1 + View
Punica granatum PGR031G2280 NC_045127.1 + View
Prunus persica Prupe.6G195900 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Pp06 + View
Prunus persica Prupe.1G527000 PF02893 - GRAM domain (GRAM) Pp01 + View
Populus trichocarpa Potri.005G159100 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Chr05 - View
Populus trichocarpa Potri.002G102800 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Chr02 + View
Phaseolus vulgaris Phvul.003G289800 Chr03 - View
Quercus lobata QL09p016983 9 + View
Quercus lobata QL06p047612 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0112041 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0014500 chr08 + View
Rhododendron simsii Rhsim10G0171300 chr10 + View
Rhododendron simsii Rhsim06G0074700 chr06 - View
Striga asiatica SGA_v2.0_scaffold45G17261 scaffold45 - View
Salvia bowleyana SalBow5G1162 GWHASIU00000003 - View
Salix brachista Sabra02G0080700 GWHAAZH00000002 + View
Simmondsia chinensis Sc03g0000220 GWHAASQ00000003 + View
Simmondsia chinensis Sc23g0000550 GWHAASQ00000023 + View
Sechium edule Sed0010130 LG04 + View
Sechium edule Sed0006640 LG10 - View
Sechium edule Sed0020203 LG14 + View
Solanum lycopersicum Solyc11g010440.3 GLABRA2 expression modulator (AHRD V3.3 *** A0A2G3CDH1_CAPCH) SL4.0ch11 + View
Solanum lycopersicum Solyc04g014250.3 GLABRA2 expression modulator (AHRD V3.3 *** A0A2G3CDH1_CAPCH) SL4.0ch04 + View
Schrenkiella parvula Sp4g01490 PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED ch4-1 + View
Solanum tuberosum PGSC0003DMG400016209 GLABRA2 expression modulator ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400023632 GLABRA2 expression modulator ST4.03ch04 + View
Selenicereus undatus Hund27001 Scaffold_2055 + View
Selenicereus undatus Hund14097 Scaffold_33679 - View
Selenicereus undatus Hund16875 Scaffold_33675 - View
Selenicereus undatus Hund16547 Scaffold_33677 - View
Trochodendron aralioides TAR625G1299 group4 + View
Trochodendron aralioides TAR376G0600 group14 + View
Trochodendron aralioides TAR628G0183 group5 + View
Trochodendron aralioides TAR381G0793 group11 - View
Theobroma cacao Thecc.08G067000 FH interacting protein 1 Chromosome_8 + View
Theobroma cacao Thecc.01G093100 FH interacting protein 1 Chromosome_1 - View
Tarenaya hassleriana THA.LOC104824905 GLABRA2 expression modulator-like NW_010966933.1 + View
Tarenaya hassleriana THA.LOC104807675 GLABRA2 expression modulator NW_010963495.1 - View
Tripterygium wilfordii TWI74G1619 NC_052234.1 - View
Tripterygium wilfordii TWI56G1096 NC_052242.1 - View
Tripterygium wilfordii TWI53G0958 NC_052244.1 + View
Tripterygium wilfordii TWI77G0367 NC_052236.1 - View
Vaccinium macrocarpon vmacro22081 Similar to GEM: GLABRA2 expression modulator (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro18572 Similar to GEM: GLABRA2 expression modulator (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G3184 CM024069.1 - View
Vitis vinifera GSVIVG01009127001 chr18 + View
Vitis vinifera GSVIVG01003615001 chrUn - View