Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen05g033950 C2H2-type zinc finger family protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: intracellular | EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein Spenn-ch05 - View
Sopen11g026150 C2H2-type zinc finger family protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein Spenn-ch11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G3330 LG-3 + View
Aethionema arabicum Aa31LG11G5270 LG-11 + View
Acer truncatum Atru.chr8.1752 chr8 - View
Acer truncatum Atru.chr12.886 chr12 + View
Actinidia chinensis Actinidia34796 Lachesis_group6 + View
Actinidia chinensis Actinidia38883 Lachesis_group17 - View
Actinidia chinensis Actinidia18546 Lachesis_group17 - View
Arabidopsis lyrata AL6G13960 scaffold_6 - View
Arabidopsis lyrata AL3G21860 scaffold_3 + View
Avicennia marina MSTRG.9137 ScioBoG_11560_HRSCAF_11609 - View
Avicennia marina MSTRG.27495 ScioBoG_8578_HRSCAF_8617 - View
Aquilegia oxysepala Aqoxy1G01102 CHR01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UTHZ1X PF13912 - C2H2-type zinc finger (zf-C2H2_6) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT3G10470 C2H2-type zinc finger family protein C2H2-type zinc finger family protein%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: petal%2C leaf whorl%2C male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: C2H2-type zinc finger family protein (TAIR:AT5G04390.1)%3B Has 2638 Blast hits to 2271 proteins in 138 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 609%3B Fungi - 41%3B Plants - 1007%3B Viruses - 0%3B Other Eukaryotes - 977 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT5G04340 6 putative c2h2 zinc finger transcription factor mRNA%2C zinc finger of Arabidopsis thaliana 6 (ZAT6)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%2C nucleic acid binding%3B LOCATED IN: intracellular%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: salt tolerance zinc finger (TAIR:AT1G27730.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB01g05895 ChrB01 + View
Brassica carinata BcaC05g29460 ChrC05 - View
Brassica carinata BcaC06g32137 ChrC06 - View
Brassica carinata BcaB05g21765 ChrB05 - View
Brassica napus C09p72350 C09 - View
Brassica napus A05p38700 A05 - View
Brassica napus C05p57570 C05 - View
Brassica napus A10p31680 A10 - View
Brassica napus C03p02020 C03 + View
Brassica oleracea BolC9t59979H C9 - View
Brassica oleracea BolC1t05394H C1 - View
Brassica oleracea BolC2t06147H C2 + View
Brassica rapa BraA02t04809Z A02 + View
Brassica rapa BraA05t22661Z A05 - View
Brassica rapa BraA10t45215Z A10 - View
Camellia sinensis var. sinensis CSS0004575 PREDICTED: zinc finger protein ZAT5 [Vitis vinifera] Chr11 + View
Camellia sinensis var. sinensis CSS0001817 C2H2-type zinc finger family protein, putative [Theobroma cacao] Chr7 - View
Capsicum annuum CAN.G459.25 PGAv.1.6.scaffold459 + View
Cannabis sativa CANSAT80G1869 NC_044372.1 - View
Cannabis sativa CANSAT56G1726 NC_044371.1 + View
Cicer arietinum L. Ca_10445_v3 Ca_LG4_v3 + View
Corylus avellana Haze_16762 Similar to ZAT5: Zinc finger protein ZAT5 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g10680 Putative Zinc finger protein ZAT5 chr2 - View
Coffea canephora Cc06_g04520 Putative Zinc finger protein ZAT5 chr6 + View
Citrus clementina Ciclev10033380m.g scaffold_4 + View
Carpinus fangiana Cfa001783 Cfa01 - View
Cardamine hirsuta CARHR084980 Zinc finger family protein Chr3 + View
Cardamine hirsuta CARHR208920 Zinc finger family protein Chr6 - View
Carya illinoinensis CiPaw.13G031800 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Chr13 + View
Carya illinoinensis CiPaw.02G170700 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G266300 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Chr01 - View
Citrullus lanatus ClCG08G007880 C2H2-type zinc finger protein CG_Chr08 + View
Citrullus lanatus ClCG05G021350 C2H2-type zinc finger family protein LENGTH=362 CG_Chr05 + View
Citrullus lanatus ClCG10G019900 Zinc finger family protein CG_Chr10 - View
Cucumis melo MELO3C012393.2 zinc finger protein ZAT5-like chr10 + View
Cucumis melo MELO3C019843.2 zinc finger protein ZAT5-like chr03 - View
Carica papaya Cpa.g.sc53.160 supercontig_53 + View
Capsella rubella Carub.0003s0971 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED scaffold_3 + View
Capsella rubella Carub.0006s0328 PTHR26374:SF208 - ZINC FINGER PROTEIN AZF3-RELATED scaffold_6 - View
Cucumis sativus L. CsaV3_2G021040 zinc finger protein ZAT5-like chr2 - View
Cucumis sativus L. CsaV3_5G035890 zinc finger protein ZAT5-like chr5 - View
Daucus carota DCAR_015505 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_019072 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_018762 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv36371 GWHABJS00000009 + View
Davidia involucrata Dinv37335 GWHABJS00000021 - View
Davidia involucrata Dinv31248 GWHABJS00000004 - View
Durio zibethinus Duzib093G2175 NW_019167937.1 - View
Durio zibethinus Duzib128G0084 NW_019168481.1 + View
Durio zibethinus Duzib114G0747 NW_019167926.1 + View
Durio zibethinus Duzib128G1064 NW_019168481.1 - View
Erigeron canadensis ECA232G1225 Conyza_canadensis_scaffold:2 - View
Erigeron canadensis ECA233G5507 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA238G2471 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.A01622 Chr01 + View
Eucalyptus grandis Eucgr.G02745 Chr07 - View
Eucalyptus grandis Eucgr.J01041 Chr10 - View
Erythranthe guttata Migut.D02294 scaffold_4 + View
Erythranthe guttata Migut.F01919 scaffold_6 - View
Erythranthe guttata Migut.J00452 scaffold_10 + View
Erythranthe guttata Migut.F01698 scaffold_6 - View
Eutrema salsugineum Thhalv10014546m.g PTHR26374:SF208 - ZINC FINGER PROTEIN AZF3-RELATED scaffold_2 - View
Eutrema salsugineum Thhalv10020904m.g PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED scaffold_13 - View
Fragaria x ananassa FAN01G1717 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Fvb7-4 + View
Fragaria x ananassa FAN03G1516 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED Fvb7-3 + View
Fragaria x ananassa FAN06G3670 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Fvb7-2 - View
Fragaria x ananassa FAN10G1214 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Fvb7-1 - View
Fragaria x ananassa FAN06G1943 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Fvb7-2 - View
Fragaria x ananassa FAN05G2513 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Fvb6-3 + View
Fragaria x ananassa FAN05G0879 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Fvb6-3 + View
Fragaria x ananassa FAN10G3836 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED Fvb7-1 - View
Fragaria vesca FvH4_7g18360 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Fvb7 - View
Gossypium hirsutum Gohir.A09G144800 PF13912 - C2H2-type zinc finger (zf-C2H2_6) A09 - View
Gossypium hirsutum Gohir.D10G208551 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED D10 - View
Gossypium hirsutum Gohir.A10G200800 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED A10 - View
Gossypium hirsutum Gohir.D09G140600 PF13912 - C2H2-type zinc finger (zf-C2H2_6) D09 - View
Glycine max Glyma.13G146400 PTHR26374//PTHR26374:SF179 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN Gm13 + View
Glycine max Glyma.19G186200 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Gm19 + View
Glycine max Glyma.13G321900 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Gm13 - View
Glycine max Glyma.12G081400 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Gm12 + View
Glycine max Glyma.03G186000 Gm03 + View
Glycine max Glyma.10G197200 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Gm10 + View
Glycine max Glyma.10G059700 PTHR26374//PTHR26374:SF179 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN Gm10 + View
Glycine max Glyma.20G193000 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Gm20 - View
Gossypium raimondii Gorai.006G161200 Chr06 - View
Gossypium raimondii Gorai.011G234400 Chr11 - View
Helianthus annuus HanXRQChr14g0455771 Putative zinc finger, C2H2-like HanXRQChr14 + View
Hydrangea macrophylla Hma1.2p1_0547F.1_g176560 Hma1.2p1_0547F.1 - View
Lupinus albus Lalb_Chr06g0169921 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED Lalb_Chr06 + View
Lupinus albus Lalb_Chr02g0151031 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED Lalb_Chr02 + View
Lupinus albus Lalb_Chr21g0312941 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED Lalb_Chr21 + View
Lotus japonicus Lj5g0000607 PTHR26374//PTHR26374:SF182 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN-RELATED chr5 - View
Lonicera japonica Lj2C23T12 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_9_71281 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_2_103521 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_6_43360 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Lsat_1_v8_lg_6 - View
Malus domestica MD04G1089100 C2H2-type zinc finger family protein Chr04 - View
Malus domestica MD03G1128800 C2H2-type zinc finger family protein Chr03 - View
Malus domestica MD01G1099800 C2H2-type zinc finger family protein Chr01 - View
Malus domestica MD07G1166800 C2H2-type zinc finger family protein Chr07 - View
Manihot esculenta Manes.04G012800 Chromosome04 - View
Manihot esculenta Manes.08G012900 Chromosome08 + View
Manihot esculenta Manes.07G095100 Chromosome07 - View
Manihot esculenta Manes.10G052000 Chromosome10 + View
Medicago truncatula Medtr1g090703 C2H2-type zinc finger protein chr1 + View
Medicago truncatula Medtr1g062780 C2H2-type zinc finger protein chr1 - View
Nelumbo nucifera Nn2g13856 chr2 + View
Nelumbo nucifera Nn6g35222 chr6 - View
Nicotiana tabacum Nitab4.5_0000096g0250 Zinc finger, C2H2-like, Zinc finger, C2H2 Nitab4.5_0000096 - View
Nicotiana tabacum Nitab4.5_0004987g0070 Zinc finger, C2H2, Zinc finger, C2H2-like Nitab4.5_0004987 - View
Olea europaea Oeu016300.1 scaffold1658 + View
Olea europaea Oeu046647.1 chr2 - View
Petunia axillaris Peaxi162Scf00982g00026 C2H2-type zinc finger family protein Peaxi162Scf00982 - View
Punica granatum PGR044G1052 NC_045134.1 - View
Punica granatum PGR102G2047 NC_045129.1 + View
Prunus persica Prupe.2G205700 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED Pp02 - View
Prunus persica Prupe.7G125800 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Pp07 - View
Pisum sativum Psat6g172600 C2H2-type zinc finger chr6LG2 - View
Papaver somniferum PSO063G2472 NC_039364.1 + View
Papaver somniferum PSO339G4808 NC_039366.1 - View
Populus trichocarpa Potri.008G032300 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Chr08 - View
Populus trichocarpa Potri.010G229400 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Chr10 + View
Populus trichocarpa Potri.006G121600 PTHR26374//PTHR26374:SF179 - FAMILY NOT NAMED // C2H2-TYPE ZINC FINGER PROTEIN Chr06 - View
Phaseolus vulgaris Phvul.001G181200 PF13912 - C2H2-type zinc finger (zf-C2H2_6) Chr01 + View
Phaseolus vulgaris Phvul.007G139600 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED Chr07 + View
Quercus lobata QL08p053244 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0362171 RcHm_v2.0_Chr1 - View
Rosa chinensis RcHm_v2.0_Chr3g0470831 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0112400 chr03 - View
Rhododendron simsii Rhsim09G0146000 chr09 - View
Rhododendron simsii Rhsim13G0100600 chr13 + View
Striga asiatica SGA_v2.0_scaffold62G21372 scaffold62 - View
Striga asiatica SGA_v2.0_scaffold40G15475 scaffold40 - View
Salvia bowleyana SalBow6G1176 GWHASIU00000002 - View
Salvia bowleyana SalBow4G1265 GWHASIU00000008 + View
Salix brachista Sabra06G0095800 GWHAAZH00000006 - View
Salix brachista Sabra10G0177900 GWHAAZH00000010 + View
Salix brachista Sabra08G0021300 GWHAAZH00000008 - View
Salix brachista Sabra04G0147500 GWHAAZH00000004 + View
Simmondsia chinensis Sc02g0001480 GWHAASQ00000002 - View
Simmondsia chinensis Sc09g0005920 GWHAASQ00000009 - View
Simmondsia chinensis Sc20g0001560 GWHAASQ00000020 - View
Sechium edule Sed0021804 LG04 + View
Sechium edule Sed0013771 LG07 - View
Sechium edule Sed0015082 LG06 + View
Solanum lycopersicum Solyc11g066400.1 Zinc finger protein (AHRD V3.3 *** A0A200R5F9_9MAGN) SL4.0ch11 + View
Solanum lycopersicum Solyc05g055500.1 Zinc finger protein (AHRD V3.3 *** A0A200R5F9_9MAGN) SL4.0ch05 - View
Schrenkiella parvula Sp3g08730 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED ch3-1 + View
Schrenkiella parvula Sp5g15530 PTHR26374:SF162 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN-RELATED ch5-1 + View
Schrenkiella parvula Sp6g38340 PTHR26374:SF182 - C2H2-TYPE ZINC FINGER PROTEIN-RELATED ch6-6 - View
Solanum tuberosum PGSC0003DMG402031064 PEThy;ZPT2-6 ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400000418 DNA-binding protein ST4.03ch11 + View
Trochodendron aralioides TAR623G0795 group7 - View
Trochodendron aralioides TAR369G0582 group18 + View
Trochodendron aralioides TAR633G1294 group2 - View
Trochodendron aralioides TAR636G2057 group1 + View
Theobroma cacao Thecc.05G071300 Nucleic acid binding protein Chromosome_5 + View
Theobroma cacao Thecc.10G088200 C2H2-type zinc finger family protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104816442 zinc finger protein ZAT5-like isoform X2 NW_010965775.1 + View
Trifolium pratense TPR.G37752 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI63G0915 NC_052240.1 - View
Tripterygium wilfordii TWI53G0256 NC_052244.1 - View
Tripterygium wilfordii TWI15G0653 NC_052247.1 - View
Tripterygium wilfordii TWI38G1901 NC_052252.1 - View
Vaccinium macrocarpon vmacro10256 Similar to ZAT5: Zinc finger protein ZAT5 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro07192 Similar to ZAT5: Zinc finger protein ZAT5 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G3139 CM024070.1 + View
Vigna mungo VMungo0720G1980 CM024071.1 + View
Vitis vinifera GSVIVG01016182001 chr13 + View