Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen07g022670 light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis | ROOT PHOTOTROPISM 2 (RPT2) | FUNCTIONS IN: signal transducer activity | INVOLVED IN: phototropism | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: NPH3 , BTB/POZ , BTB/POZ fold | BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein Spenn-ch07 - View
Sopen02g006200 Phototropic-responsive NPH3 family protein | FUNCTIONS IN: signal transducer activity | INVOLVED IN: response to light stimulus | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: NPH3 , BTB/POZ , BTB/POZ fold , BTB/POZ-like | BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein Spenn-ch02 - View
Sopen01g048130 Involved in blue light response signaling pathway | interacts with the blue light photoreceptor NPH1.Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains. | NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3) | CONTAINS InterPro DOMAIN/s: NPH3 , BTB/POZ fold , BTB/POZ-like | BEST Arabidopsis thaliana protein match is: Phototropic-responsive NPH3 family protein Spenn-ch01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G17570 LG-1 - View
Acer truncatum Atru.chr6.1227 chr6 + View
Actinidia chinensis Actinidia24013 Lachesis_group2 + View
Actinidia chinensis Actinidia00293 Lachesis_group12 - View
Avicennia marina MSTRG.16608 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.27811 ScioBoG_94932_HRSCAF_95134 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZKJP05 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4T09L2 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PKZ6FU PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IPHF02 PTHR32370//PTHR32370:SF37 - FAMILY NOT NAMED // BTB/POZ DOMAIN-CONTAINING PROTEIN DOT3-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Brassica napus C03p61960 C03 - View
Brassica oleracea BolC3t18455H C3 - View
Cicer arietinum L. Ca_18371_v3 Ca_LG6_v3 + View
Coffea canephora Cc02_g21030 Root phototropism protein 3 chr2 - View
Cardamine hirsuta CARHR278260 Phototropic-responsive NPH3 family protein Chr8 + View
Carya illinoinensis CiPaw.06G156700 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 Chr06 + View
Chenopodium quinoa AUR62027122 RPT3: Root phototropism protein 3 C_Quinoa_Scaffold_2314 - View
Chenopodium quinoa AUR62012572 At3g22104: BTB/POZ domain-containing protein At3g22104 C_Quinoa_Scaffold_2715 - View
Cucumis sativus L. CsaV3_4G009650 root phototropism protein 3 chr4 + View
Daucus carota DCAR_021887 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv24161 GWHABJS00000005 - View
Durio zibethinus Duzib248G0007 NW_019168048.1 + View
Durio zibethinus Duzib132G1054 NW_019167915.1 - View
Erigeron canadensis ECA234G1085 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA236G2139 Conyza_canadensis_scaffold:3 + View
Erythranthe guttata Migut.N01090 scaffold_14 + View
Erythranthe guttata Migut.B00566 scaffold_2 - View
Eutrema salsugineum Thhalv10003710m.g PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 scaffold_6 - View
Glycine max Glyma.13G258700 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Gm13 - View
Glycine max Glyma.07G180900 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Gm07 + View
Lotus japonicus Lj4g0014549 PTHR32370//PTHR32370:SF6 - FAMILY NOT NAMED // ROOT PHOTOTROPISM PROTEIN 3 chr4 - View
Lonicera japonica Lj9A348T68 GWHAAZE00000009 - View
Lonicera japonica Lj5A232T95 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_7_83740 Lsat_1_v8_lg_7 + View
Malus domestica MD05G1047100 Phototropic-responsive NPH3 family protein Chr05 + View
Malus domestica MD10G1053800 Phototropic-responsive NPH3 family protein Chr10 + View
Medicago truncatula Medtr4g093850 phototropic-responsive NPH3 family protein chr4 - View
Petunia axillaris Peaxi162Scf00003g03341 Phototropic-responsive NPH3 family protein Peaxi162Scf00003 - View
Punica granatum PGR042G2747 NC_045130.1 + View
Phaseolus vulgaris Phvul.002G211400 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Chr02 - View
Phaseolus vulgaris Phvul.006G203600 PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Chr06 - View
Sechium edule Sed0026147 LG10 + View
Sechium edule Sed0011914 LG13 + View
Sechium edule Sed0016365 LG07 - View
Solanum lycopersicum Solyc10g047530.2 Phototropic-responsive NPH3 family protein (AHRD V3.3 *** A0A2U1PJR6_ARTAN) SL4.0ch10 + View
Solanum tuberosum PGSC0003DMG400002400 NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3) ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400033569 NPH3 (NON-PHOTOTROPIC HYPOCOTYL 3) ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400005453 Signal transducer ST4.03ch10 + View
Tripterygium wilfordii TWI59G0183 NC_052248.1 + View
Vaccinium macrocarpon vmacro01850 Similar to RPT3: Root phototropism protein 3 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View