Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G7180 LG-2 - View
Acer truncatum Atru.chr9.1305 chr9 - View
Actinidia chinensis Actinidia27470 Lachesis_group14 - View
Arabidopsis lyrata AL8G10520 scaffold_8 + View
Aquilegia oxysepala Aqoxy3G02796 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T3D6CG PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT1G62260 mitochondrial editing factor 9 Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9)%2C an E subclass PPR protein required for RNA editing. mitochondrial editing factor 9 (MEF9)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cytidine to uridine editing%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1)%3B Has 48341 Blast hits to 14172 proteins in 260 species: Archae - 3%3B Bacteria - 22%3B Metazoa - 134%3B Fungi - 182%3B Plants - 47365%3B Viruses - 0%3B Other Eukaryotes - 635 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT5G47460 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G09950.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g34250 ChrC06 + View
Brassica napus C02p48690 C02 - View
Brassica napus C07p31110 C07 - View
Brassica oleracea BolC7t43653H C7 - View
Brassica oleracea BolC2t10961H C2 - View
Camellia sinensis var. sinensis CSS0016296 PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Vitis vinifera] Chr12 - View
Capsicum annuum CAN.G1058.35 PGAv.1.6.scaffold1058 - View
Cannabis sativa CANSAT21G0184 NC_044374.1 + View
Cannabis sativa CANSAT21G0334 NC_044374.1 - View
Cicer arietinum L. Ca_24582_v3 Ca_LG8_v3 + View
Coffea canephora Cc08_g12350 Putative pentatricopeptide repeat-containing protein At5g47460 chr8 - View
Citrus clementina Ciclev10019350m.g scaffold_3 - View
Carpinus fangiana Cfa012725 Cfa05 + View
Cardamine hirsuta CARHR049870 Pentatricopeptide repeat-containing protein, putative Chr2 + View
Cardamine hirsuta CARHR173900 Pentatricopeptide repeat-containing protein Chr6 + View
Cucumis melo MELO3C033997.2 Pentatricopeptide repeat-containing protein chr09 - View
Corchorus olitorius COL.COLO4_37168 hypothetical protein AWUE01023851.1 - View
Carica papaya Cpa.g.sc29.165 supercontig_29 + View
Chenopodium quinoa AUR62019951 PCMP-E103: Putative pentatricopeptide repeat-containing protein At5g47460 C_Quinoa_Scaffold_1480 + View
Chenopodium quinoa AUR62007088 PCMP-E103: Putative pentatricopeptide repeat-containing protein At5g47460 C_Quinoa_Scaffold_1971 + View
Capsella rubella Carub.0008s0031 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) scaffold_8 + View
Cucumis sativus L. CsaV3_5G004280 Pentatricopeptide repeat chr5 + View
Daucus carota DCAR_006834 hypothetical protein DCARv2_Chr2 + View
Durio zibethinus Duzib068G0875 NW_019167838.1 - View
Eucalyptus grandis Eucgr.E00421 Chr05 - View
Erythranthe guttata Migut.A01109 scaffold_1 - View
Eutrema salsugineum Thhalv10000835m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_20 - View
Fragaria x ananassa FAN04G2925 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb5-4 + View
Fragaria x ananassa FAN06G1508 PF00067//PF00466//PF01535//PF13041//PF13812//PF14432 - Cytochrome P450 (p450) // Ribosomal protein L10 (Ribosomal_L10) // PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb7-2 + View
Fragaria x ananassa FAN18G4424 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb5-1 - View
Fragaria x ananassa FAN08G2235 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb5-3 - View
Fragaria vesca FvH4_5g19050 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb5 + View
Gossypium hirsutum Gohir.D08G193300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D08 + View
Gossypium hirsutum Gohir.A11G026700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A11 + View
Gossypium hirsutum Gohir.D11G026000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D11 + View
Glycine max Glyma.11G033300 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Gm11 + View
Glycine max Glyma.01G208900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm01 - View
Gossypium raimondii Gorai.007G028200 Chr07 + View
Lupinus albus Lalb_Chr05g0214431 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Lalb_Chr05 - View
Lonicera japonica Lj8P263T13 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_6_90861 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_2_77520 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_6_17820 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_6 + View
Malus domestica MD06G1056400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr06 + View
Manihot esculenta Manes.02G040100 Chromosome02 + View
Olea europaea Oeu019600.2 scaffold1834 + View
Oryza sativa ssp. japonica Os10g0558600 Pentatricopeptide repeat domain containing protein. chr10 + View
Petunia axillaris Peaxi162Scf00174g00032 Pentatricopeptide repeat-containing protein Peaxi162Scf00174 + View
Punica granatum PGR042G3438 NC_045130.1 - View
Pisum sativum Psat2g177880 PPR repeat family chr2LG1 - View
Phaseolus vulgaris Phvul.002G058100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 - View
Phaseolus vulgaris Phvul.010G058300 Chr10 - View
Quercus lobata QL12p012010 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0203501 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0109600 chr07 + View
Striga asiatica SGA_v2.0_scaffold52G19181 scaffold52 + View
Solanum lycopersicum Solyc08g078570.3 Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A2U1KP81_ARTAN) SL4.0ch08 - View
Schrenkiella parvula Sp2g02380 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch2-1 + View
Schrenkiella parvula Sp2g12180 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) ch2-4 - View
Solanum tuberosum PGSC0003DMG400004764 Pentatricopeptide repeat-containing protein ST4.03ch08 - View
Trochodendron aralioides TAR374G0238 group12 - View
Theobroma cacao Thecc.03G250300 Pentatricopeptide repeat superfamily protein Chromosome_3 - View
Tripterygium wilfordii TWI15G0014 NC_052247.1 - View
Vigna mungo VMungo1215G3127 CM024074.1 + View
Vitis vinifera GSVIVG01004712001 chrUn + View