Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G3740 LG-8 - View
Acer truncatum Atru.chr7.2398 chr7 + View
Actinidia chinensis Actinidia13244 Lachesis_group18 - View
Arabidopsis thaliana AT4G32430 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1)%3B Has 44749 Blast hits to 13591 proteins in 248 species: Archae - 1%3B Bacteria - 28%3B Metazoa - 59%3B Fungi - 99%3B Plants - 43967%3B Viruses - 0%3B Other Eukaryotes - 595 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT3G16610 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1)%3B Has 44074 Blast hits to 13558 proteins in 215 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 87%3B Fungi - 74%3B Plants - 43358%3B Viruses - 0%3B Other Eukaryotes - 549 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis. EARLY CHLOROPLAST BIOGENESIS2 (ECB2)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 49765 Blast hits to 13993 proteins in 266 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 64%3B Fungi - 140%3B Plants - 48782%3B Viruses - 0%3B Other Eukaryotes - 773 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC08g45243 ChrC08 + View
Brassica napus A01p05940 A01 - View
Brassica napus C01p06550 C01 - View
Brassica oleracea BolC3t17018H C3 - View
Brassica oleracea BolC1t04744H C1 + View
Brassica rapa BraA07t30258Z A07 + View
Brassica rapa BraA01t00560Z A01 - View
Camellia sinensis var. sinensis CSS0039962 PREDICTED: pentatricopeptide repeat-containing protein At1g71490-like [Nicotiana tomentosiformis] Chr13 + View
Camellia sinensis var. sinensis CSS0036469 PREDICTED: pentatricopeptide repeat-containing protein At1g20230 [Vitis vinifera] Chr9 + View
Capsicum annuum CAN.G1230.10 PGAv.1.6.scaffold1230 - View
Cicer arietinum L. Ca_12936_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_11370_v3 Ca_LG4_v3 - View
Corylus avellana Haze_21518 Similar to PCMP-H83: Pentatricopeptide repeat-containing protein At3g63370, chloroplastic (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc08_g00860 Putative Pentatricopeptide repeat-containing protein At4g21065 chr8 - View
Citrus clementina Ciclev10010438m.g scaffold_1 - View
Carpinus fangiana Cfa013145 Cfa05 - View
Cardamine hirsuta CARHR091870 Pentatricopeptide repeat-containing protein Chr3 - View
Cardamine hirsuta CARHR016080 Pentatricopeptide repeat-containing protein Chr1 + View
Cardamine hirsuta CARHR240350 Pentatricopeptide repeat-containing protein Chr7 + View
Cardamine hirsuta CARHR115120 Smr domain containing protein Chr4 - View
Carya illinoinensis CiPaw.07G221800 PF12854//PF13041//PF13812//PF14432 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr07 + View
Citrullus lanatus ClCG08G011850 Pentatricopeptide repeat-containing protein CG_Chr08 + View
Citrullus lanatus ClCG08G013260 Pentatricopeptide repeat-containing protein CG_Chr08 + View
Cucumis melo MELO3C031581.2 pentatricopeptide repeat-containing protein At2g15690-like chr05 - View
Capsella rubella Carub.0003s1634 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_3 - View
Capsella rubella Carub.0001s1529 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_1 + View
Cucumis sativus L. CsaV3_2G031990 Pentatricopeptide repeat-containing protein chr2 + View
Daucus carota DCAR_016174 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_003094 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv03410 GWHABJS00000017 - View
Durio zibethinus Duzib168G1883 NW_019168159.1 - View
Erigeron canadensis ECA248G1043 Conyza_canadensis_scaffold:9 - View
Erythranthe guttata Migut.E01787 scaffold_5 + View
Eutrema salsugineum Thhalv10022175m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_13 + View
Fragaria x ananassa FAN15G0328 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 - View
Fragaria x ananassa FAN14G1665 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 + View
Fragaria vesca FvH4_2g29361 PF12854//PF13041//PF14432 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2 - View
Gossypium hirsutum Gohir.A05G054700 PF12854//PF13041//PF13812 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A05 - View
Gossypium hirsutum Gohir.D05G056300 PF12854//PF13041//PF13812//PF14432 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) D05 + View
Glycine max Glyma.17G209700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm17 + View
Gossypium raimondii Gorai.009G057300 Chr09 + View
Lupinus albus Lalb_Chr24g0402211 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr24 - View
Lupinus albus Lalb_Chr24g0396421 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr24 + View
Lupinus albus Lalb_Chr13g0301991 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr13 + View
Lotus japonicus Lj5g0009234 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) chr5 + View
Lactuca sativa Lsat_1_v5_gn_6_114181 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_6 + View
Malus domestica MD08G1148200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr08 + View
Malus domestica MD12G1245600 Pentatricopeptide repeat (PPR) superfamily protein Chr12 - View
Manihot esculenta Manes.03G016100 Chromosome03 - View
Manihot esculenta Manes.03G025700 Chromosome03 + View
Medicago truncatula Medtr1g012380 PPR containing plant-like protein chr1 + View
Nicotiana tabacum Nitab4.5_0005761g0010 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0005761 + View
Nicotiana tabacum Nitab4.5_0000109g0270 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000109 + View
Petunia axillaris Peaxi162Scf00643g00039 Pentatricopeptide repeat-containing protein Peaxi162Scf00643 - View
Punica granatum PGR102G2566 NC_045129.1 + View
Prunus persica Prupe.1G479200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 + View
Pisum sativum Psat6g027360 PPR repeat family chr6LG2 + View
Pisum sativum Psat7g252960 PPR repeat family chr7LG7 + View
Populus trichocarpa Potri.018G040100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr18 - View
Populus trichocarpa Potri.006G252400 PF12854//PF13041//PF14432 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr06 + View
Phaseolus vulgaris Phvul.010G144500 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 - View
Phaseolus vulgaris Phvul.001G051800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr01 - View
Quercus lobata QL02p102365 CM012294 + View
Quercus lobata QL02p022121 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0298171 RcHm_v2.0_Chr6 - View
Striga asiatica SGA_v2.0_scaffold64G21900 scaffold64 - View
Striga asiatica SGA_v2.0_scaffold20G09145 scaffold20 - View
Salvia bowleyana SalBow4G2835 GWHASIU00000008 - View
Salix brachista Sabra06G0197300 GWHAAZH00000006 + View
Sechium edule Sed0020051 LG03 + View
Solanum lycopersicum Solyc06g066080.1 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QS26_9MAGN) SL4.0ch06 - View
Schrenkiella parvula Sp4g04850 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch4-2 - View
Schrenkiella parvula Sp1g13870 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch1-1 + View
Solanum tuberosum PGSC0003DMG400020461 Conserved gene of unknown function ST4.03ch06 + View
Trochodendron aralioides TAR636G2184 group1 + View
Theobroma cacao Thecc.09G027200 Chromosome_9 - View
Tarenaya hassleriana THA.LOC104803665 pentatricopeptide repeat-containing protein At2g25580-like NW_010971389.1 - View
Trifolium pratense TPR.G15648 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI32G0293 NC_052254.1 + View
Tripterygium wilfordii TWI63G1253 NC_052240.1 + View
Vaccinium macrocarpon vmacro11156 Similar to PCMP-H28: Pentatricopeptide repeat-containing protein At4g21065 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro19010 Similar to PCMP-E51: Putative pentatricopeptide repeat-containing protein At3g15930 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06277 Similar to PCMP-H60: Pentatricopeptide repeat-containing protein At2g27610 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0080 CM024072.1 + View
Vigna mungo VMungo0647G2506 CM024073.1 + View