Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen03g036040 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. | Integrase-type DNA-binding superfamily protein | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch03 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr7.2513 chr7 + View
Actinidia chinensis Actinidia14109 Lachesis_group14 - View
Actinidia chinensis Actinidia18234 Lachesis_group13 + View
Actinidia chinensis Actinidia13205 Lachesis_group18 - View
Actinidia chinensis Actinidia23090 Lachesis_group27 - View
Actinidia chinensis Actinidia22309 Lachesis_group23 + View
Arabidopsis lyrata AL6G36850 scaffold_6 - View
Amaranthus hybridus Ah.16g104870 AmaHy_arrow1_Scaffold_16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2YN4P9 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 arahy.Tifrunner.gnm1.Arahy.16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JRIM60 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 arahy.Tifrunner.gnm1.Arahy.06 + View
Brassica carinata BcaC04g23576 ChrC04 - View
Brassica carinata BcaB08g37083 ChrB08 - View
Brassica carinata BcaC04g19254 ChrC04 - View
Brassica napus C09p65690 C09 - View
Brassica napus C02p59780 C02 + View
Brassica napus A10p26540 A10 - View
Brassica oleracea BolC9t59392H C9 - View
Brassica rapa BraA06t26520Z A06 - View
Brassica rapa BraA10t44711Z A10 - View
Beta vulgaris EL10Ac2g04142 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0049793 PREDICTED: ethylene-responsive transcription factor ERF003-like [Nelumbo nucifera] Chr12 - View
Capsicum annuum CAN.G199.69 PGAv.1.6.scaffold199 - View
Capsicum annuum CAN.G407.46 PGAv.1.6.scaffold407 - View
Cicer arietinum L. Ca_13050_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_15763_v3 Ca_LG5_v3 + View
Corylus avellana Haze_21446 Similar to ERF003: Ethylene-responsive transcription factor ERF003 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc08_g00110 Ethylene-responsive transcription factor ERF003 chr8 - View
Citrus clementina Ciclev10009593m.g scaffold_1 - View
Carpinus fangiana Cfa013089 Cfa05 - View
Carya illinoinensis CiPaw.02G160800 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr02 - View
Carya illinoinensis CiPaw.01G252600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr01 - View
Carya illinoinensis CiPaw.08G007600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr08 - View
Carya illinoinensis CiPaw.07G227700 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr07 + View
Citrullus lanatus ClCG05G016530 Ethylene-responsive transcription factor 8 CG_Chr05 - View
Citrullus lanatus ClCG08G013610 Ethylene-responsive transcription factor 4 CG_Chr08 + View
Cucumis melo MELO3C016980.2 ethylene-responsive transcription factor ERF003-like chr07 + View
Cucumis melo MELO3C011287.2 ethylene-responsive transcription factor ERF003-like chr03 - View
Cucumis melo MELO3C023458.2 ethylene-responsive transcription factor ERF003-like chr01 + View
Carica papaya Cpa.g.sc127.4 supercontig_127 + View
Chenopodium quinoa AUR62031580 ERF003: Ethylene-responsive transcription factor ERF003 C_Quinoa_Scaffold_1206 - View
Chenopodium quinoa AUR62012456 ERF003: Ethylene-responsive transcription factor ERF003 C_Quinoa_Scaffold_1995 - View
Cucumis sativus L. CsaV3_4G036780 ethylene-responsive transcription factor ERF003-like chr4 - View
Cucumis sativus L. CsaV3_7G031980 ethylene-responsive transcription factor ERF003-like chr7 + View
Cucumis sativus L. CsaV3_2G032360 ethylene-responsive transcription factor ERF003-like chr2 + View
Davidia involucrata Dinv16499 GWHABJS00000017 + View
Davidia involucrata Dinv23306 GWHABJS00000019 + View
Durio zibethinus Duzib168G0395 NW_019168159.1 - View
Durio zibethinus Duzib150G0946 NW_019167882.1 - View
Eucalyptus grandis Eucgr.C02719 Chr03 - View
Erythranthe guttata Migut.I00708 scaffold_9 - View
Eutrema salsugineum Thhalv10004973m.g PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 scaffold_6 - View
Eutrema salsugineum Thhalv10015363m.g PTHR31194:SF13 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2-RELATED scaffold_2 + View
Fragaria x ananassa FAN05G4062 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb6-3 - View
Fragaria x ananassa FAN14G1778 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb6-1 - View
Fragaria x ananassa FAN15G3406 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Fvb2-4 + View
Gossypium hirsutum Gohir.A05G120600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 A05 + View
Gossypium hirsutum Gohir.A05G057500 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 A05 + View
Gossypium hirsutum Gohir.A07G030900 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 A07 + View
Gossypium hirsutum Gohir.D07G034800 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 D07 + View
Glycine max Glyma.04G062900 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm04 - View
Glycine max Glyma.14G111600 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm14 - View
Glycine max Glyma.17G216100 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm17 + View
Glycine max Glyma.06G064000 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Gm06 - View
Gossypium raimondii Gorai.001G036500 Chr01 + View
Gossypium raimondii Gorai.009G060600 Chr09 + View
Helianthus annuus HanXRQChr02g0050101 Probable protein PPLZ02 HanXRQChr02 - View
Lupinus albus Lalb_Chr08g0244311 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Lalb_Chr08 + View
Lupinus albus Lalb_Chr11g0063571 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Lalb_Chr11 - View
Lotus japonicus Lj1g0020772 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 chr1 + View
Lonicera japonica Lj7P729T27 GWHAAZE00000007 + View
Lonicera japonica Lj8A734T45 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_6_19600 Lsat_1_v8_lg_6 - View
Malus domestica MD15G1036500 Integrase-type DNA-binding superfamily protein Chr15 + View
Manihot esculenta Manes.16G126900 Chromosome16 + View
Manihot esculenta Manes.03G011000 Chromosome03 - View
Medicago truncatula Medtr3g106290 ethylene response factor chr3 - View
Nelumbo nucifera Nn2g12277 chr2 + View
Nicotiana tabacum Nitab4.5_0002503g0070 AP2/ERF domain, DNA-binding domain Nitab4.5_0002503 + View
Nicotiana tabacum Nitab4.5_0003811g0100 AP2/ERF domain, DNA-binding domain Nitab4.5_0003811 - View
Olea europaea Oeu056771.1 chr13 - View
Petunia axillaris Peaxi162Scf00430g00311 Integrase-type DNA-binding superfamily protein Peaxi162Scf00430 + View
Petunia axillaris Peaxi162Scf00332g00325 AP/ERF transcription factor [Ipomoea batatas] Peaxi162Scf00332 - View
Punica granatum PGR102G0750 NC_045129.1 + View
Punica granatum PGR044G1534 NC_045134.1 + View
Populus trichocarpa Potri.018G021900 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr18 - View
Populus trichocarpa Potri.006G261200 PTHR31194//PTHR31194:SF4 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr06 + View
Phaseolus vulgaris Phvul.001G046900 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr01 - View
Phaseolus vulgaris Phvul.009G089300 PTHR31194:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003 Chr09 - View
Quercus lobata QL02p019983 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0299771 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim07G0162400 chr07 + View
Rhododendron simsii Rhsim08G0208300 chr08 + View
Striga asiatica SGA_v2.0_scaffold5G02754 scaffold5 - View
Salix brachista Sabra18G0024800 GWHAAZH00000018 - View
Sechium edule Sed0027877 LG03 + View
Solanum lycopersicum Solyc06g065820.3 Ethylene Response Factor H.1 SL4.0ch06 - View
Solanum lycopersicum Solyc06g068360.3 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2WLG1_CAPBA) SL4.0ch06 - View
Solanum tuberosum PGSC0003DMG400026136 Ethylene response factor 1 ST4.03ch06 + View
Trochodendron aralioides TAR636G2340 group1 + View
Trochodendron aralioides TAR626G1863 group3 + View
Theobroma cacao Thecc.09G018400 Integrase-type DNA-binding superfamily protein Chromosome_9 - View
Trifolium pratense TPR.G3129 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI34G0020 NC_052235.1 - View
Tripterygium wilfordii TWI32G0238 NC_052254.1 + View
Tripterygium wilfordii TWI12G0404 NC_052243.1 + View
Vaccinium macrocarpon vmacro19038 Similar to ERF003: Ethylene-responsive transcription factor ERF003 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro11229 Similar to ERF003: Ethylene-responsive transcription factor ERF003 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro05146 Similar to ERF003: Ethylene-responsive transcription factor ERF003 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1294 CM024073.1 + View
Vigna mungo VMungo0647G2365 CM024073.1 - View
Vigna mungo VMungo1309G2774 CM024072.1 + View
Vitis vinifera GSVIVG01035911001 chr4 - View