Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen06g016050 putative laccase, a member of laccase family of genes (17 members in Arabidopsis). | laccase 5 (LAC5) | FUNCTIONS IN: laccase activity | INVOLVED IN: response to copper ion | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 8 plant structures | EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 12 Spenn-ch06 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6490 LG-5 + View
Aethionema arabicum Aa31LG11G6490 LG-11 + View
Aethionema arabicum Aa31LG5G19210 LG-5 + View
Actinidia chinensis Actinidia23197 Lachesis_group20 + View
Actinidia chinensis Actinidia00974 Lachesis_group3 - View
Actinidia chinensis Actinidia29731 Lachesis_group22 - View
Actinidia chinensis Actinidia33897 Lachesis_group3 + View
Arabidopsis lyrata AL4G38190 scaffold_4 - View
Arabidopsis lyrata AL6G15290 scaffold_6 + View
Avicennia marina MSTRG.190 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.8920 ScioBoG_11560_HRSCAF_11609 + View
Amaranthus hybridus Ah.10g036140 Laccase-12 (EC 1.10.3.2) (Benzenediol:oxygen oxidoreductase 12) (Diphenol oxidase 12) (Urishiol oxidase 12) AmaHy_arrow1_Scaffold_10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SXC6IH PTHR11709:SF22 - LACCASE-12-RELATED arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT2G40370 laccase 5 putative laccase%2C a member of laccase family of genes (17 members in Arabidopsis). laccase 5 (LAC5)%3B FUNCTIONS IN: laccase activity%3B INVOLVED IN: response to copper ion%3B LOCATED IN: endomembrane system%2C apoplast%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Multicopper oxidase%2C type 3 (InterPro:IPR011707)%2C Laccase (InterPro:IPR017761)%2C Multicopper oxidase%2C type 2 (InterPro:IPR011706)%2C Cupredoxin (InterPro:IPR008972)%2C Multicopper oxidase%2C copper-binding site (InterPro:IPR002355)%2C Multicopper oxidase%2C type 1 (InterPro:IPR001117)%3B BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1)%3B Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37%3B Bacteria - 4008%3B Metazoa - 431%3B Fungi - 3685%3B Plants - 1575%3B Viruses - 0%3B Other Eukaryotes - 384 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT5G05390 laccase 12 putative laccase%2C a member of laccase family of genes (17 members in Arabidopsis). laccase 12 (LAC12)%3B FUNCTIONS IN: laccase activity%3B INVOLVED IN: oxidation reduction%2C lignin catabolic process%3B LOCATED IN: endomembrane system%2C apoplast%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Multicopper oxidase%2C type 3 (InterPro:IPR011707)%2C Laccase (InterPro:IPR017761)%2C Multicopper oxidase%2C type 2 (InterPro:IPR011706)%2C Cupredoxin (InterPro:IPR008972)%2C Multicopper oxidase%2C copper-binding site (InterPro:IPR002355)%2C Multicopper oxidase%2C type 1 (InterPro:IPR001117)%3B BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC03g13158 ChrC03 + View
Brassica carinata BcaC06g32253 ChrC06 + View
Brassica carinata BcaC02g07376 ChrC02 - View
Brassica napus C02p02330 C02 + View
Brassica napus A05p06100 A05 + View
Brassica napus C09p71310 C09 - View
Brassica napus C04p68150 C04 - View
Brassica napus A10p30810 A10 - View
Brassica oleracea BolC4t22324H C4 + View
Brassica oleracea BolC2t06198H C2 + View
Brassica rapa BraA04t18533Z A04 - View
Brassica rapa BraA05t19573Z A05 + View
Brassica rapa BraA10t45123Z A10 - View
Brassica rapa BraA02t04847Z A02 + View
Beta vulgaris EL10Ac2g04783 PTHR11709//PTHR11709:SF80 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0035921 PREDICTED: laccase-12-like [Nicotiana tomentosiformis] Chr1 + View
Camellia sinensis var. sinensis CSS0017559 unnamed protein product [Coffea canephora] Chr7 - View
Coffea canephora Cc07_g14670 Laccase-17 chr7 + View
Cardamine hirsuta CARHR123520 laccase 3 Chr4 - View
Cardamine hirsuta CARHR206010 Laccase-13 Chr6 - View
Cardamine hirsuta CARHR135450 laccase 5 Chr4 - View
Cardamine hirsuta CARHR211370 Laccase family protein Chr6 - View
Carya illinoinensis CiPaw.09G203900 PTHR11709//PTHR11709:SF9 - MULTI-COPPER OXIDASE // LACCASE-7-RELATED Chr09 + View
Carya illinoinensis CiPaw.02G196300 PTHR11709:SF22 - LACCASE-12-RELATED Chr02 - View
Cucumis melo MELO3C020517.2 Laccase chr12 - View
Capsella rubella Carub.0004s2261 PTHR11709:SF22 - LACCASE-12-RELATED scaffold_4 - View
Capsella rubella Carub.0006s0432 PTHR11709:SF22 - LACCASE-12-RELATED scaffold_6 + View
Daucus carota DCAR_024800 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_011854 hypothetical protein DCARv2_Chr3 - View
Durio zibethinus Duzib128G1451 NW_019168481.1 + View
Durio zibethinus Duzib114G0964 NW_019167926.1 + View
Erigeron canadensis ECA233G0657 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.J00166 Chr10 + View
Erythranthe guttata Migut.F01429 scaffold_6 - View
Eutrema salsugineum Thhalv10016439m.g PTHR11709:SF22 - LACCASE-12-RELATED scaffold_10 - View
Eutrema salsugineum Thhalv10015589m.g PTHR11709:SF22 - LACCASE-12-RELATED scaffold_2 + View
Fragaria x ananassa FAN01G2500 PTHR11709:SF22 - LACCASE-12-RELATED Fvb7-4 + View
Gossypium hirsutum Gohir.A04G086400 PTHR11709:SF9 - LACCASE-7-RELATED A04 + View
Gossypium hirsutum Gohir.A06G160400 PTHR11709:SF22 - LACCASE-12-RELATED A06 + View
Gossypium hirsutum Gohir.D04G126500 PTHR11709:SF9 - LACCASE-7-RELATED D04 + View
Gossypium hirsutum Gohir.D06G166600 PTHR11709:SF22 - LACCASE-12-RELATED D06 + View
Gossypium hirsutum Gohir.D10G249700 PTHR11709:SF22 - LACCASE-12-RELATED D10 + View
Glycine max Glyma.14G056100 PTHR11709:SF22 - LACCASE-12-RELATED Gm14 + View
Glycine max Glyma.14G198900 PTHR11709:SF68 - LACCASE-13-RELATED Gm14 - View
Glycine max Glyma.11G164000 PTHR11709:SF68 - LACCASE-13-RELATED Gm11 + View
Gossypium raimondii Gorai.010G194200 Chr10 + View
Gossypium raimondii Gorai.012G109500 Chr12 + View
Hydrangea macrophylla Hma1.2p1_0292F.1_g115600 Hma1.2p1_0292F.1 - View
Lotus japonicus LjContig00357g0008267 PTHR11709:SF22 - LACCASE-12-RELATED Contig00357 + View
Lonicera japonica Lj1C962T5 GWHAAZE00000001 - View
Lonicera japonica Lj8A60G43 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_8_13161 PTHR11709:SF22 - LACCASE-12-RELATED Lsat_1_v8_lg_8 + View
Malus domestica MD07G1227800 laccase 5 Chr07 - View
Malus domestica MD01G1158900 laccase 5 Chr01 - View
Nicotiana tabacum Nitab4.5_0000375g0040 Multicopper oxidase, type 2, Multicopper oxidase, type 3, Laccase, Cupredoxin, Multicopper oxidase, copper-binding site, Multicopper oxidase, type 1 Nitab4.5_0000375 - View
Nicotiana tabacum Nitab4.5_0000058g0010 Multicopper oxidase, copper-binding site, Cupredoxin, Multicopper oxidase, type 3, Multicopper oxidase, type 1, Laccase, Multicopper oxidase, type 2 Nitab4.5_0000058 + View
Oryza sativa ssp. japonica Os01g0827300 Putative laccase precursor, Abiotic stress response chr01 + View
Oryza sativa ssp. japonica Os12g0108000 Similar to Laccase (Diphenol oxidase). chr12 + View
Petunia axillaris Peaxi162Scf01149g00114 laccase 12 Peaxi162Scf01149 - View
Punica granatum PGR044G2680 NC_045134.1 - View
Papaver somniferum PSO765G0064 NW_020632152.1 + View
Populus trichocarpa Potri.010G183500 PTHR11709:SF22 - LACCASE-12-RELATED Chr10 + View
Phaseolus vulgaris Phvul.008G220300 PTHR11709:SF22 - LACCASE-12-RELATED Chr08 + View
Phaseolus vulgaris Phvul.008G252800 PTHR11709:SF68 - LACCASE-13-RELATED Chr08 + View
Striga asiatica SGA_v2.0_scaffold60G20957 scaffold60 + View
Salix brachista Sabra10G0140800 GWHAAZH00000010 + View
Solanum lycopersicum Solyc09g011960.2 Laccase (AHRD V3.3 *** K4CRM1_SOLLC) SL4.0ch09 + View
Solanum lycopersicum Solyc06g082240.2 Laccase (AHRD V3.3 *** K4CA83_SOLLC) SL4.0ch06 + View
Solanum lycopersicum Solyc05g052340.4 Laccase (AHRD V3.3 *** K4C1R5_SOLLC) SL4.0ch05 - View
Schrenkiella parvula Sp4g12800 PTHR11709:SF68 - LACCASE-13-RELATED ch4-6 - View
Schrenkiella parvula Sp4g22690 PTHR11709//PTHR11709:SF22 - MULTI-COPPER OXIDASE // LACCASE-12-RELATED ch4-6 - View
Schrenkiella parvula Sp6g37430 PTHR11709:SF22 - LACCASE-12-RELATED ch6-6 - View
Solanum tuberosum PGSC0003DMG400027168 Laccase 90a ST4.03ch05 - View
Selenicereus undatus Hund13526 Scaffold_33679 + View
Trochodendron aralioides TAR636G2719 group1 - View
Theobroma cacao Thecc.10G009300 Laccase 12 Chromosome_10 + View
Tarenaya hassleriana THA.LOC104816528 laccase-12 NW_010965775.1 + View
Tripterygium wilfordii TWI09G1272 NC_052245.1 - View
Vaccinium macrocarpon vmacro09996 Similar to LAC5: Laccase-5 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01032744001 chr13 - View
Zea mays Zm00001eb195100 Zm00001e023953 Laccase Putative laccase family protein 4 + View