Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen04g002250 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. | Integrase-type DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch04 + View
Sopen05g005260 encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. | Integrase-type DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: sperm cell | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein Spenn-ch05 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4860 LG-10 - View
Acer truncatum Atru.chr9.831 chr9 + View
Acer truncatum Atru.chr11.1270 chr11 - View
Actinidia chinensis Actinidia16648 Lachesis_group4 - View
Actinidia chinensis Actinidia39827 Lachesis_group13 + View
Actinidia chinensis Actinidia14886 Lachesis_group14 + View
Actinidia chinensis Actinidia13662 Lachesis_group10 + View
Arabidopsis lyrata AL1G55980 scaffold_1 + View
Arabidopsis lyrata AL2G27450 scaffold_2 - View
Avicennia marina MSTRG.833 ScioBoG_102831_HRSCAF_103044 + View
Avicennia marina MSTRG.7670 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.2238 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.13528 ScioBoG_18778_HRSCAF_18863 + View
Amaranthus hybridus Ah.03g137720 Ethylene-responsive transcription factor ERF118 AmaHy_arrow1_Scaffold_3 - View
Aquilegia oxysepala Aqoxy3G00313 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VG3SGX PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT1G25470 AP2 domain-containing transcription factor family protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. AP2 domain-containing transcription factor family protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Pathogenesis-related genes transcriptional activator PTI6 (InterPro:IPR017392)%2C DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G68550.2)%3B Has 2801 Blast hits to 2801 proteins in 148 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 2796%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G68550 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: sperm cell%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT3G25890.2)%3B Has 4835 Blast hits to 4832 proteins in 228 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 14%3B Fungi - 3%3B Plants - 4809%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G49120 Integrase-type DNA-binding superfamily protein encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. Integrase-type DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT1G68550.2)%3B Has 4493 Blast hits to 4490 proteins in 215 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 4485%3B Viruses - 0%3B Other Eukaryotes - 8 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB05g24395 ChrB05 - View
Brassica carinata BcaC03g14964 ChrC03 - View
Brassica napus A02p15150 A02 - View
Brassica napus C06p41370 C06 + View
Brassica oleracea BolC5t31229H C5 + View
Brassica oleracea BolC2t08581H C2 - View
Brassica rapa BraA02t06580Z A02 - View
Camellia sinensis var. sinensis CSS0021582 PREDICTED: ethylene-responsive transcription factor ERF118 isoform X2 [Vitis vinifera] Chr15 + View
Camellia sinensis var. sinensis CSS0005103 PREDICTED: ethylene-responsive transcription factor ERF118 isoform X1 [Vitis vinifera] Chr2 - View
Capsicum annuum CAN.G438.135 PGAv.1.6.scaffold438 + View
Cannabis sativa CANSAT01G0626 NC_044373.1 - View
Cicer arietinum L. Ca_25450_v3 Ca_LG8_v3 - View
Cicer arietinum L. Ca_11177_v3 Ca_LG4_v3 - View
Corylus avellana Haze_17476 Similar to ERF118: Ethylene-responsive transcription factor ERF118 (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc11_g10210 Putative Ethylene-responsive transcription factor ERF118 chr11 - View
Citrus clementina Ciclev10020886m.g scaffold_3 + View
Citrus clementina Ciclev10032059m.g scaffold_4 - View
Carpinus fangiana Cfa019784 Cfa08 - View
Carpinus fangiana Cfa018601 Cfa07 - View
Cardamine hirsuta CARHR061340 Ethylene-responsive transcription factor Chr2 - View
Carya illinoinensis CiPaw.15G084300 PTHR31194:SF8 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 Chr15 + View
Carya illinoinensis CiPaw.15G129900 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Chr15 + View
Citrullus lanatus ClCG05G022760 Ethylene-responsive transcription factor CG_Chr05 - View
Cucumis melo MELO3C002085.2 ethylene-responsive transcription factor ERF071 chr12 - View
Cucumis melo MELO3C012242.2 ethylene-responsive transcription factor ERF118 chr10 - View
Chenopodium quinoa AUR62035238 ERF118: Ethylene-responsive transcription factor ERF118 C_Quinoa_Scaffold_2868 - View
Capsella rubella Carub.0001s2502 PTHR31194//PTHR31194:SF0 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED scaffold_1 + View
Capsella rubella Carub.0002s1506 PTHR31194//PTHR31194:SF8 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 scaffold_2 - View
Cucumis sativus L. CsaV3_1G006600 ethylene-responsive transcription factor ERF071 chr1 + View
Cucumis sativus L. CsaV3_5G034270 ethylene-responsive transcription factor ERF118 chr5 + View
Daucus carota DCAR_007241 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv09800 GWHABJS00000006 - View
Davidia involucrata Dinv21093 GWHABJS00000018 + View
Davidia involucrata Dinv31642 GWHABJS00000008 - View
Durio zibethinus Duzib251G0520 NW_019167971.1 - View
Durio zibethinus Duzib084G0085 NW_019167827.1 + View
Erigeron canadensis ECA233G2743 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA246G1557 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.B00720 Chr02 - View
Eucalyptus grandis Eucgr.G02326 Chr07 - View
Erythranthe guttata Migut.L01068 scaffold_12 - View
Erythranthe guttata Migut.E00335 scaffold_5 + View
Eutrema salsugineum Thhalv10012016m.g PTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED scaffold_7 - View
Fragaria x ananassa FAN18G0532 PTHR31190//PTHR31190:SF27 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED Fvb5-1 - View
Fragaria x ananassa FAN18G2719 PTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED Fvb5-1 - View
Fragaria x ananassa FAN08G2020 PF00847 - AP2 domain (AP2) Fvb5-3 + View
Fragaria x ananassa FAN07G1058 PF00847 - AP2 domain (AP2) Fvb4-4 + View
Fragaria x ananassa FAN04G1687 PTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED Fvb5-4 - View
Fragaria vesca FvH4_4g27491 PTHR31194//PTHR31194:SF8 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 Fvb4 - View
Fragaria vesca FvH4_5g12250 PTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED Fvb5 - View
Gossypium hirsutum Gohir.D12G170700 PTHR31194//PTHR31194:SF8 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 D12 - View
Gossypium hirsutum Gohir.D12G266750 PTHR31190//PTHR31190:SF27 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED D12 + View
Gossypium hirsutum Gohir.A12G167300 PTHR31194//PTHR31194:SF8 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 A12 - View
Gossypium hirsutum Gohir.A12G266351 PTHR31190//PTHR31190:SF27 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED A12 + View
Glycine max Glyma.08G040900 PF00847 - AP2 domain (AP2) Gm08 + View
Glycine max Glyma.10G274600 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gm10 - View
Glycine max Glyma.20G115300 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Gm20 + View
Gossypium raimondii Gorai.008G286700 Chr08 + View
Gossypium raimondii Gorai.008G183300 Chr08 - View
Hydrangea macrophylla Hma1.2p1_0592F.1_g185350 Hma1.2p1_0592F.1 + View
Hydrangea macrophylla Hma1.2p1_0061F.1_g033990 Hma1.2p1_0061F.1 - View
Lupinus albus Lalb_Chr21g0308961 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Lalb_Chr21 - View
Lupinus albus Lalb_Chr06g0166131 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Lalb_Chr06 - View
Lupinus albus Lalb_Chr02g0146021 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Lalb_Chr02 - View
Lupinus albus Lalb_Chr10g0099991 PF00847 - AP2 domain (AP2) Lalb_Chr10 + View
Lotus japonicus Lj2g0013467 PF00847 - AP2 domain (AP2) chr2 + View
Lotus japonicus Lj5g0018780 PF00847 - AP2 domain (AP2) chr5 + View
Lonicera japonica Lj3E1016G0 GWHAAZE00000003 - View
Lonicera japonica Lj6C759T21 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_3_59341 Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_4_17901 PF00847 - AP2 domain (AP2) Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_8_39481 Lsat_1_v8_lg_8 - View
Malus domestica MD06G1215500 Integrase-type DNA-binding superfamily protein Chr06 + View
Malus domestica MD16G1043500 Integrase-type DNA-binding superfamily protein Chr16 - View
Malus domestica MD13G1042600 Integrase-type DNA-binding superfamily protein Chr13 - View
Manihot esculenta Manes.06G068900 Chromosome06 - View
Manihot esculenta Manes.14G101900 Chromosome14 + View
Manihot esculenta Manes.01G012200 Chromosome01 + View
Medicago truncatula Medtr1g110970 ethylene-responsive transcription factor ERF118-like protein chr1 - View
Nicotiana tabacum Nitab4.5_0000057g0300 AP2/ERF domain, DNA-binding domain Nitab4.5_0000057 - View
Nicotiana tabacum Nitab4.5_0000974g0030 DNA-binding domain, AP2/ERF domain Nitab4.5_0000974 - View
Petunia axillaris Peaxi162Scf00015g00091 Unknown protein Peaxi162Scf00015 + View
Petunia axillaris Peaxi162Scf00382g00043 Integrase-type DNA-binding superfamily protein Peaxi162Scf00382 + View
Punica granatum PGR119G0142 NC_045132.1 - View
Punica granatum PGR044G1399 NC_045134.1 - View
Prunus persica Prupe.1G310100 PTHR31194:SF8 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 Pp01 + View
Prunus persica Prupe.5G220700 PTHR31194:SF0 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF3-RELATED Pp05 + View
Populus trichocarpa Potri.010G125600 PTHR31194//PTHR31194:SF8 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 Chr10 - View
Populus trichocarpa Potri.008G120100 PTHR31194//PTHR31194:SF8 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 Chr08 + View
Populus trichocarpa Potri.015G054500 PTHR31190//PTHR31190:SF27 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED Chr15 + View
Phaseolus vulgaris Phvul.007G027000 PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Chr07 + View
Phaseolus vulgaris Phvul.002G315900 PF00847 - AP2 domain (AP2) Chr02 + View
Quercus lobata QL01p043151 1 - View
Rosa chinensis RcHm_v2.0_Chr7g0185311 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr4g0435261 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim08G0135200 chr08 - View
Rhododendron simsii Rhsim12G0083300 chr12 + View
Rhododendron simsii Rhsim09G0108400 chr09 - View
Striga asiatica SGA_v2.0_scaffold170G38757 scaffold170 + View
Simmondsia chinensis Sc04g0006500 GWHAASQ00000004 + View
Simmondsia chinensis Sc04g0003530 GWHAASQ00000004 - View
Sechium edule Sed0001080 LG03 + View
Sechium edule Sed0001112 LG07 + View
Sechium edule Sed0014784 LG08 + View
Sechium edule Sed0002522 LG01 + View
Solanum lycopersicum Solyc04g007170.3 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2V7U7_CAPBA) SL4.0ch04 + View
Solanum lycopersicum Solyc03g119580.1 Solanum lycopersicum Cytokinin Response Factor 9 SL4.0ch03 - View
Schrenkiella parvula Sp1g36010 PTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED ch1-2 + View
Solanum tuberosum PGSC0003DMG400014541 DNA binding protein ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400005631 AP2/ERF domain-containing transcription factor ST4.03ch03 - View
Trochodendron aralioides TAR371G0284 group13 - View
Trochodendron aralioides TAR374G0492 group12 - View
Trochodendron aralioides TAR629G2500 group0 + View
Trochodendron aralioides TAR622G1395 group8 - View
Theobroma cacao Thecc.03G034300 Uncharacterized protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104821940 ethylene-responsive transcription factor ERF118 NW_010966617.1 - View
Tarenaya hassleriana THA.LOC104808260 ethylene-responsive transcription factor ERF118-like NW_010960187.1 + View
Tripterygium wilfordii TWI75G1354 NC_052253.1 - View
Tripterygium wilfordii TWI31G0025 NC_052233.1 - View
Tripterygium wilfordii TWI79G1494 NC_052238.1 - View
Tripterygium wilfordii TWI81G0827 NC_052251.1 + View
Utricularia gibba unitig_52.g17136 unitig_52 - View
Vaccinium macrocarpon vmacro10554 Similar to ERF118: Ethylene-responsive transcription factor ERF118 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro01378 Similar to ERF118: Ethylene-responsive transcription factor ERF118 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G1796 CM024071.1 - View
Vitis vinifera GSVIVG01011902001 chr1 + View