Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sopen02g013930 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G15540 LG-8 + View
Acer truncatum Atru.chr3.547 chr3 + View
Arabidopsis lyrata AL3G51870 scaffold_3 - View
Avicennia marina MSTRG.23543 ScioBoG_3895_HRSCAF_3912 - View
Amaranthus hybridus Ah.03g139350 Pentatricopeptide repeat-containing protein At4g36680, mitochondrial AmaHy_arrow1_Scaffold_3 + View
Arabidopsis thaliana AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18520.1)%3B Has 31603 Blast hits to 11701 proteins in 258 species: Archae - 3%3B Bacteria - 12%3B Metazoa - 242%3B Fungi - 164%3B Plants - 30323%3B Viruses - 0%3B Other Eukaryotes - 859 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: membrane%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G36680.1)%3B Has 27260 Blast hits to 10896 proteins in 232 species: Archae - 1%3B Bacteria - 5%3B Metazoa - 93%3B Fungi - 122%3B Plants - 26343%3B Viruses - 0%3B Other Eukaryotes - 696 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB07g31660 ChrB07 + View
Brassica carinata BcaC01g00449 ChrC01 + View
Brassica napus A08p22340 A08 - View
Brassica napus C03p79970 C03 + View
Brassica napus C09p14070 C09 - View
Brassica oleracea BolC3t20249H C3 + View
Brassica oleracea BolC9t54304H C9 - View
Brassica rapa BraA08t34190Z A08 - View
Beta vulgaris EL10Ac6g14919 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0037549 unknown [Solanum bulbocastanum] Chr2 + View
Capsicum annuum CAN.G358.118 PGAv.1.6.scaffold358 - View
Cannabis sativa CANSAT01G1424 NC_044373.1 + View
Corylus avellana Haze_15114 Similar to At4g36680: Pentatricopeptide repeat-containing protein At4g36680, mitochondrial (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc07_g09260 Pentatricopeptide repeat-containing protein At4g36680, mitochondrial chr7 + View
Citrus clementina Ciclev10025762m.g scaffold_7 - View
Cardamine hirsuta CARHR109130 Pentatricopeptide repeat-containing protein Chr3 - View
Cardamine hirsuta CARHR245040 Pentatricopeptide repeat-containing protein Chr7 - View
Citrullus lanatus ClCG07G009040 Pentatricopeptide repeat-containing protein CG_Chr07 + View
Cucumis melo MELO3C017551.2 Pentatricopeptide repeat-containing protein chr07 + View
Chenopodium quinoa AUR62007998 At4g36680: Pentatricopeptide repeat-containing protein At4g36680, mitochondrial C_Quinoa_Scaffold_2646 - View
Capsella rubella Carub.0003s3272 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_3 + View
Cucumis sativus L. CsaV3_4G005170 Pentatricopeptide repeat-containing protein, mitochondrial chr4 - View
Daucus carota DCAR_017247 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_025928 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv26815 GWHABJS00000021 - View
Durio zibethinus Duzib264G1293 NW_019167960.1 + View
Durio zibethinus Duzib147G0693 NW_019168470.1 + View
Erigeron canadensis ECA238G4369 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.I02459 Chr09 - View
Erythranthe guttata Migut.H00180 scaffold_8 - View
Eutrema salsugineum Thhalv10023199m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_11 + View
Fragaria x ananassa FAN19G1656 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1-4 - View
Fragaria x ananassa FAN23G1659 PF05055//PF05659//PF13041 - Protein of unknown function (DUF677) (DUF677) // Arabidopsis broad-spectrum mildew resistance protein RPW8 (RPW8) // PPR repeat family (PPR_2) Fvb1-3 - View
Fragaria vesca FvH4_1g13650 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1 - View
Gossypium hirsutum Gohir.D12G065400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D12 - View
Gossypium hirsutum Gohir.A12G065300 PF13041 - PPR repeat family (PPR_2) A12 - View
Gossypium raimondii Gorai.008G068700 Chr08 - View
Lonicera japonica Lj2P449T26 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_2_76721 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_2 - View
Malus domestica MD02G1151200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr02 - View
Malus domestica MD15G1265700 Tetratricopeptide repeat (TPR)-like superfamily protein Chr15 - View
Nicotiana tabacum Nitab4.5_0000628g0030 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000628 - View
Nicotiana tabacum Nitab4.5_0001827g0140 Pentatricopeptide repeat Nitab4.5_0001827 - View
Olea europaea Oeu014912.1 scaffold1595 - View
Petunia axillaris Peaxi162Scf00008g03911 pentatricopeptide repeat 336 Peaxi162Scf00008 - View
Petunia axillaris Peaxi162Scf00515g00029 pentatricopeptide repeat 336 Peaxi162Scf00515 + View
Punica granatum PGR119G1317 NC_045132.1 + View
Prunus persica Prupe.7G151800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp07 + View
Populus trichocarpa Potri.007G028400 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr07 - View
Populus trichocarpa Potri.005G125400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr05 - View
Quercus lobata QL06p045511 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0102001 RcHm_v2.0_Chr2 - View
Striga asiatica SGA_v2.0_scaffold33G13374 scaffold33 - View
Salix brachista Sabra05G0103000 GWHAAZH00000005 - View
Salix brachista Sabra07G0024600 GWHAAZH00000007 - View
Simmondsia chinensis Sc07g0000240 GWHAASQ00000007 + View
Solanum lycopersicum Solyc02g062910.3 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G3A487_CAPAN) SL4.0ch02 - View
Solanum lycopersicum Solyc02g085530.3 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *-* A0A2G3AAB2_CAPAN) SL4.0ch02 - View
Schrenkiella parvula Sp3g31980 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch3-6 - View
Solanum tuberosum PGSC0003DMG400015467 Pentatricopeptide repeat-containing protein, mitochondrial ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400040010 Pentatricopeptide repeat-containing protein ST4.03ch02 - View
Trochodendron aralioides TAR376G0069 group14 + View
Theobroma cacao Thecc.01G038900 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104807440 pentatricopeptide repeat-containing protein At4g36680%2C mitochondrial isoform X2 NW_010963495.1 + View
Tarenaya hassleriana THA.LOC104819795 pentatricopeptide repeat-containing protein At4g36680%2C mitochondrial-like NW_010966177.1 - View
Tripterygium wilfordii TWI09G1082 NC_052245.1 + View
Tripterygium wilfordii TWI53G1937 NC_052244.1 + View
Vitis vinifera GSVIVG01018992001 chr4 + View