Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG4G14550 | LG-4 | - | View | |
Aethionema arabicum | Aa31LG1G12560 | LG-1 | + | View | |
Acer truncatum | Atru.chr3.3637 | chr3 | - | View | |
Actinidia chinensis | Actinidia07133 | Lachesis_group13 | + | View | |
Arabidopsis lyrata | AL8G37170 | scaffold_8 | + | View | |
Avicennia marina | MSTRG.21128 | ScioBoG_26769_HRSCAF_26899 | - | View | |
Avicennia marina | MSTRG.18656 | ScioBoG_22153_HRSCAF_22259 | + | View | |
Avicennia marina | MSTRG.17808 | ScioBoG_19834_HRSCAF_19925 | - | View | |
Amaranthus hybridus | Ah.01g002850 | AmaHy_arrow1_Scaffold_1 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.47SX7B | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | arahy.Tifrunner.gnm1.Arahy.18 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.0990KC | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | arahy.Tifrunner.gnm1.Arahy.03 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.IW12TT | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | arahy.Tifrunner.gnm1.Arahy.13 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.H8QW84 | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | arahy.Tifrunner.gnm1.Arahy.08 | + | View |
Arabidopsis thaliana | AT5G60580 | RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1)%3B Has 1587 Blast hits to 1239 proteins in 158 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 421%3B Fungi - 112%3B Plants - 632%3B Viruses - 18%3B Other Eukaryotes - 394 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G09760.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr5 | + | View |
Amborella trichopoda | ATR0115G007 | AmTr_v1.0_scaffold00175 | + | View | |
Brassica carinata | BcaB05g22655 | ChrB05 | + | View | |
Brassica carinata | BcaB08g36353 | ChrB08 | + | View | |
Brassica carinata | BcaC03g13958 | ChrC03 | - | View | |
Brassica carinata | BcaC04g19716 | ChrC04 | + | View | |
Brassica napus | A10p17770 | A10 | + | View | |
Brassica napus | C02p11580 | C02 | - | View | |
Brassica napus | C09p53220 | C09 | + | View | |
Brassica napus | BNapus_Darmor_BZH_scaffold_38p00020 | BNapus_Darmor_BZH_scaffold_38 | + | View | |
Brassica oleracea | BolC2t07244H | C2 | - | View | |
Brassica oleracea | BolC9t58197H | C9 | + | View | |
Brassica rapa | BraA02t05715Z | A02 | - | View | |
Brassica rapa | BraA10t43854Z | A10 | + | View | |
Beta vulgaris | EL10Ac9g22506 | PTHR23012//PTHR23012:SF81 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Chr9_EL10_PGA_scaffold8 | + | View |
Camellia sinensis var. sinensis | CSS0024836 | PREDICTED: uncharacterized protein LOC105170709 [Sesamum indicum] | Chr11 | - | View |
Camellia sinensis var. sinensis | CSS0049615 | hypothetical protein VITISV_024209 [Vitis vinifera] | Chr13 | + | View |
Capsicum annuum | CAN.G631.21 | PGAv.1.6.scaffold631 | + | View | |
Cannabis sativa | CANSAT54G2392 | NC_044375.1 | + | View | |
Cicer arietinum L. | Ca_01418_v3 | Ca_LG1_v3 | - | View | |
Cicer arietinum L. | Ca_05254_v3 | Ca_LG2_v3 | + | View | |
Corylus avellana | Haze_20610 | Protein of unknown function | 10 | + | View |
Corylus avellana | Haze_23840 | Protein of unknown function | 6 | - | View |
Coffea canephora | Cc01_g11190 | RING/U-box superfamily protein | chr1 | - | View |
Coffea canephora | Cc06_g03850 | RING/U-box superfamily protein | chr6 | - | View |
Citrus clementina | Ciclev10011512m.g | scaffold_6 | + | View | |
Citrus clementina | Ciclev10028219m.g | scaffold_8 | - | View | |
Carpinus fangiana | Cfa011323 | Cfa04 | - | View | |
Carpinus fangiana | Cfa017538 | Cfa07 | - | View | |
Cardamine hirsuta | CARHR274240 | RING/FYVE/PHD zinc finger superfamily protein | Chr8 | + | View |
Carya illinoinensis | CiPaw.14G080200 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | Chr14 | + | View |
Carya illinoinensis | CiPaw.13G112400 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | Chr13 | + | View |
Citrullus lanatus | ClCG03G002200 | RING/U-box superfamily protein LENGTH=494 | CG_Chr03 | - | View |
Citrullus lanatus | ClCG02G021130 | RING/U-box superfamily protein LENGTH=494 | CG_Chr02 | + | View |
Citrullus lanatus | ClCG10G020370 | RING/U-box superfamily protein LENGTH=494 | CG_Chr10 | + | View |
Cucumis melo | MELO3C005058.2 | RING/U-box protein | chr12 | - | View |
Cucumis melo | MELO3C009333.2 | Zinc finger protein | chr04 | + | View |
Cucumis melo | MELO3C025770.2 | RING/U-box protein | chr11 | + | View |
Carica papaya | Cpa.g.sc216.15 | supercontig_216 | - | View | |
Chenopodium quinoa | AUR62024991 | Protein of unknown function | C_Quinoa_Scaffold_4082 | - | View |
Chenopodium quinoa | AUR62039629 | Protein of unknown function | C_Quinoa_Scaffold_3093 | + | View |
Capsella rubella | Carub.0008s2126 | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | scaffold_8 | + | View |
Cucumis sativus L. | CsaV3_6G013890 | RING/U-box protein | chr6 | + | View |
Cucumis sativus L. | CsaV3_1G012850 | RING/U-box protein | chr1 | - | View |
Daucus carota | DCAR_017710 | hypothetical protein | DCARv2_Chr5 | + | View |
Daucus carota | DCAR_009291 | hypothetical protein | DCARv2_Chr3 | - | View |
Daucus carota | DCAR_018814 | hypothetical protein | DCARv2_Chr5 | - | View |
Daucus carota | DCAR_022737 | hypothetical protein | DCARv2_Chr6 | - | View |
Davidia involucrata | Dinv37278 | GWHABJS00000021 | + | View | |
Davidia involucrata | Dinv32754 | GWHABJS00000010 | - | View | |
Durio zibethinus | Duzib093G1740 | NW_019167937.1 | + | View | |
Durio zibethinus | Duzib168G0625 | NW_019168159.1 | - | View | |
Erigeron canadensis | ECA238G3013 | Conyza_canadensis_scaffold:6 | - | View | |
Erigeron canadensis | ECA233G5857 | Conyza_canadensis_scaffold:1 | - | View | |
Eucalyptus grandis | Eucgr.K03240 | Chr11 | - | View | |
Eucalyptus grandis | Eucgr.J00933 | Chr10 | - | View | |
Eucalyptus grandis | Eucgr.B02493 | Chr02 | + | View | |
Erythranthe guttata | Migut.D02218 | scaffold_4 | + | View | |
Eutrema salsugineum | Thhalv10013381m.g | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | scaffold_2 | - | View |
Fragaria x ananassa | FAN16G0176 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Fvb3-3 | - | View |
Fragaria x ananassa | FAN21G1580 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Fvb3-2 | - | View |
Fragaria x ananassa | FAN25G1476 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Fvb3-1 | + | View |
Fragaria x ananassa | FAN11G1310 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Fvb3-4 | + | View |
Fragaria vesca | FvH4_3g32510 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Fvb3 | - | View |
Gossypium hirsutum | Gohir.A05G102400 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | A05 | + | View |
Gossypium hirsutum | Gohir.D05G102100 | PTHR23012//PTHR23012:SF79//PTHR23012:SF81 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED | D05 | + | View |
Gossypium hirsutum | Gohir.D03G134000 | PTHR23012//PTHR23012:SF81 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | D03 | + | View |
Gossypium hirsutum | Gohir.D08G214500 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | D08 | + | View |
Gossypium hirsutum | Gohir.A08G197300 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | A08 | + | View |
Glycine max | Glyma.11G147100 | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | Gm11 | - | View |
Glycine max | Glyma.12G068000 | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | Gm12 | - | View |
Glycine max | Glyma.12G173300 | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | Gm12 | - | View |
Glycine max | Glyma.13G326500 | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | Gm13 | - | View |
Glycine max | Glyma.13G139200 | PTHR23012//PTHR23012:SF98 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Gm13 | - | View |
Glycine max | Glyma.03G180200 | PTHR23012//PTHR23012:SF98 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Gm03 | - | View |
Gossypium raimondii | Gorai.009G106300 | Chr09 | + | View | |
Gossypium raimondii | Gorai.004G228500 | Chr04 | + | View | |
Helianthus annuus | HanXRQChr13g0403501 | Putative zinc finger, RING-CH-type; Zinc finger, RING/FYVE/PHD-type | HanXRQChr13 | + | View |
Helianthus annuus | HanXRQChr14g0452891 | Uncharacterized protein, partly conserved in plant genome(s), partly supported by expression data | HanXRQChr14 | - | View |
Helianthus annuus | HanXRQChr02g0055771 | Probable RING/U-box superfamily protein | HanXRQChr02 | + | View |
Hydrangea macrophylla | Hma1.2p1_1031F.1_g250000 | Hma1.2p1_1031F.1 | + | View | |
Lupinus albus | Lalb_Chr01g0018891 | PTHR23012//PTHR23012:SF98 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Lalb_Chr01 | + | View |
Lupinus albus | Lalb_Chr03g0027301 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | Lalb_Chr03 | + | View |
Lupinus albus | Lalb_Chr24g0394591 | PTHR23012//PTHR23012:SF81 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Lalb_Chr24 | + | View |
Lupinus albus | Lalb_Chr19g0137321 | PTHR23012//PTHR23012:SF25 - MEMBRANE ASSOCIATED RING FINGER // RING/U-BOX DOMAIN-CONTAINING PROTEIN | Lalb_Chr19 | - | View |
Lotus japonicus | Lj3g0010603 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | chr3 | - | View |
Lotus japonicus | Lj3g0023136 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | chr3 | + | View |
Lonicera japonica | Lj2C1029T9 | GWHAAZE00000002 | - | View | |
Lonicera japonica | Lj1C191G1 | GWHAAZE00000001 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_2_98320 | Lsat_1_v8_lg_2 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_6_46001 | Lsat_1_v8_lg_6 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_1_65381 | Lsat_1_v8_lg_1 | - | View | |
Magnolia biondii | MBI10_g06417_MAGBIO | AED:0.19 | Chr10 | - | View |
Malus domestica | MD11G1134800 | RING/U-box superfamily protein | Chr11 | + | View |
Malus domestica | MD04G1099800 | RING/U-box superfamily protein | Chr04 | + | View |
Malus domestica | MD03G1116800 | RING/U-box superfamily protein | Chr03 | + | View |
Manihot esculenta | Manes.04G021800 | Chromosome04 | - | View | |
Manihot esculenta | Manes.08G006100 | Chromosome08 | - | View | |
Manihot esculenta | Manes.11G144500 | Chromosome11 | + | View | |
Medicago truncatula | Medtr2g094130 | RING/U-box protein | chr2 | + | View |
Medicago truncatula | Medtr4g459440 | RING/U-box protein, putative | chr4 | - | View |
Nelumbo nucifera | Nn2g10778 | chr2 | + | View | |
Nicotiana tabacum | Nitab4.5_0000650g0200 | Zinc finger, RING-CH-type, Zinc finger, RING/FYVE/PHD-type | Nitab4.5_0000650 | + | View |
Nicotiana tabacum | Nitab4.5_0003701g0020 | Zinc finger, RING-CH-type, Zinc finger, RING/FYVE/PHD-type | Nitab4.5_0003701 | - | View |
Nicotiana tabacum | Nitab4.5_0000181g0080 | Zinc finger, RING-CH-type, Zinc finger, RING/FYVE/PHD-type | Nitab4.5_0000181 | + | View |
Olea europaea | Oeu001265.1 | scaffold1031 | + | View | |
Olea europaea | Oeu030178.1 | chr4 | + | View | |
Petunia axillaris | Peaxi162Scf00270g00822 | RING/U-box superfamily protein | Peaxi162Scf00270 | - | View |
Punica granatum | PGR119G0979 | NC_045132.1 | - | View | |
Punica granatum | PGR142G2882 | NC_045128.1 | - | View | |
Prunus persica | Prupe.6G100700 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Pp06 | + | View |
Pisum sativum | Psat7g224800 | RING-variant domain | chr7LG7 | - | View |
Pisum sativum | Psat5g278200 | RING-variant domain | chr5LG3 | + | View |
Papaver somniferum | PSO339G5119 | NC_039366.1 | - | View | |
Papaver somniferum | PSO384G0883 | NC_039368.1 | + | View | |
Papaver somniferum | PSO063G0287 | NC_039364.1 | + | View | |
Papaver somniferum | PSO339G4144 | NC_039366.1 | - | View | |
Populus trichocarpa | Potri.009G013300 | PTHR23012//PTHR23012:SF79 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED | Chr09 | + | View |
Phaseolus vulgaris | Phvul.005G135900 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | Chr05 | - | View |
Phaseolus vulgaris | Phvul.011G078700 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | Chr11 | + | View |
Quercus lobata | QL01p022338 | 1 | - | View | |
Quercus lobata | QL07p044656 | 7 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr5g0059571 | RcHm_v2.0_Chr5 | - | View | |
Rhododendron simsii | Rhsim05G0182200 | chr05 | + | View | |
Rhododendron simsii | Rhsim13G0094000 | chr13 | + | View | |
Striga asiatica | SGA_v2.0_scaffold75G24868 | scaffold75 | + | View | |
Striga asiatica | SGA_v2.0_scaffold97G29225 | scaffold97 | + | View | |
Salvia bowleyana | SalBow3G2354 | GWHASIU00000006 | + | View | |
Salvia bowleyana | SalBow3G4423 | GWHASIU00000006 | - | View | |
Salix brachista | Sabra06G0101500 | GWHAAZH00000006 | + | View | |
Salix brachista | Sabra09G0008200 | GWHAAZH00000009 | - | View | |
Sechium edule | Sed0011267 | LG05 | - | View | |
Sechium edule | Sed0022909 | LG01 | + | View | |
Sechium edule | Sed0013815 | LG04 | - | View | |
Schrenkiella parvula | Sp6g22150 | PTHR23012:SF25 - RING/U-BOX DOMAIN-CONTAINING PROTEIN | ch6-6 | + | View |
Solanum pennellii | Sopen06g005790 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type , Zinc finger, RING-CH-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch06 | - | View |
Solanum pennellii | Sopen09g002570 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type , Zinc finger, RING-CH-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch09 | - | View |
Solanum pennellii | Sopen11g028070 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type , Zinc finger, RING-CH-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch11 | + | View |
Solanum tuberosum | PGSC0003DMG400029165 | Zinc finger family protein | ST4.03ch06 | + | View |
Solanum tuberosum | PGSC0003DMG400008105 | Zinc finger family protein | ST4.03ch11 | + | View |
Trochodendron aralioides | TAR623G1263 | group7 | - | View | |
Trochodendron aralioides | TAR633G2057 | group2 | - | View | |
Theobroma cacao | Thecc.05G057800 | RING/U-box superfamily protein | Chromosome_5 | - | View |
Theobroma cacao | Thecc.09G339800 | RING/U-box superfamily protein | Chromosome_9 | + | View |
Tarenaya hassleriana | THA.LOC104810853 | uncharacterized protein LOC104810853 | NW_010965304.1 | + | View |
Trifolium pratense | TPR.G15530 | Tp57577_TGAC_v2_LG4 | - | View | |
Trifolium pratense | TPR.G11575 | Tp57577_TGAC_v2_LG7 | + | View | |
Tripterygium wilfordii | TWI31G0053 | NC_052233.1 | + | View | |
Tripterygium wilfordii | TWI74G1408 | NC_052234.1 | + | View | |
Tripterygium wilfordii | TWI79G1047 | NC_052238.1 | + | View | |
Vaccinium macrocarpon | vmacro03195 | Protein of unknown function | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1127G2174 | CM024076.1 | + | View | |
Vigna mungo | VMungo1080G1600 | CM024079.1 | + | View | |
Vitis vinifera | GSVIVG01025179001 | chr6 | - | View | |
Vitis vinifera | GSVIVG01025673001 | chr8 | + | View |