Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc05g055230.2 40S ribosomal protein S17 (AHRD V3.3 *** A0A2G2WU93_CAPBA) SL4.0ch05 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr12.1054_Atru.chr12.1055 chr12 + View
Acer truncatum Atru.chr8.1415 chr8 - View
Actinidia chinensis Actinidia18623 Lachesis_group17 + View
Actinidia chinensis Actinidia06170 Lachesis_group20 + View
Arabidopsis lyrata AL6G14440 scaffold_6 + View
Avicennia marina MSTRG.9046 ScioBoG_11560_HRSCAF_11609 + View
Amaranthus hybridus Ah.08g210240 AmaHy_arrow1_Scaffold_8 - View
Aquilegia oxysepala Aqoxy2G01153 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EAS95G PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MM7BLT arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT5G04780 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G02750.1)%3B Has 38256 Blast hits to 13510 proteins in 241 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 59%3B Fungi - 56%3B Plants - 37619%3B Viruses - 0%3B Other Eukaryotes - 509 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g32183 ChrC06 + View
Brassica napus C09p72090 C09 - View
Camellia sinensis var. sinensis CSS0027611 PREDICTED: 40S ribosomal protein S17-like isoform X1 [Solanum tuberosum] Chr7 - View
Camellia sinensis var. sinensis CSS0011438 PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Vitis vinifera] Chr11 - View
Capsicum annuum CAN.G143.11 PGAv.1.6.scaffold143 + View
Capsicum annuum CAN.G1433.20 PGAv.1.6.scaffold1433 - View
Cicer arietinum L. Ca_25651_v3 scaffold00113_v3 - View
Corylus avellana Haze_03480 Similar to PCMP-H35: Putative pentatricopeptide repeat-containing protein At5g09950 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc02_g09520 40S ribosomal protein S17 chr2 + View
Citrus clementina Ciclev10013058m.g scaffold_6 - View
Citrus clementina Ciclev10014627m.g scaffold_2 + View
Carpinus fangiana Cfa010540 Cfa04 - View
Cardamine hirsuta CARHR208480 40S ribosomal protein S17 Chr6 - View
Carya illinoinensis CiPaw.13G041400 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Chr13 + View
Carya illinoinensis CiPaw.14G034200 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr14 + View
Citrullus lanatus ClCG08G008360 Pentatricopeptide repeat protein 79 CG_Chr08 + View
Citrullus lanatus ClCG10G018590 40S ribosomal protein S17, putative CG_Chr10 - View
Cucumis melo MELO3C009509.2 40S ribosomal protein S17-like chr04 - View
Cucumis melo MELO3C019907.2 40S ribosomal protein S17 chr03 - View
Cucumis melo MELO3C024569.2 Pentatricopeptide repeat-containing family protein chr08 - View
Carica papaya Cpa.g.sc33.158 supercontig_33 - View
Chenopodium quinoa AUR62034184 RPS17D: 40S ribosomal protein S17-4 C_Quinoa_Scaffold_2123 - View
Capsella rubella Carub.0006s0367 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 + View
Cucumis sativus L. CsaV3_6G004340 pentatricopeptide repeat-containing protein At5g04780 chr6 + View
Daucus carota DCAR_020728 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_009189 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv07590 GWHABJS00000009 + View
Davidia involucrata Dinv31464 GWHABJS00000004 - View
Davidia involucrata Dinv21193 GWHABJS00000021 - View
Durio zibethinus Duzib106G0757 NW_019168492.1 - View
Durio zibethinus Duzib093G2077 NW_019167937.1 - View
Erigeron canadensis ECA238G0791 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.A02621 Chr01 - View
Eucalyptus grandis Eucgr.G02685 Chr07 - View
Erythranthe guttata Migut.F01598 scaffold_6 - View
Erythranthe guttata Migut.L01807 scaffold_12 + View
Eutrema salsugineum Thhalv10012749m.g scaffold_2 - View
Eutrema salsugineum Thhalv10015995m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_2 + View
Eutrema salsugineum Thhalv10010201m.g PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_16 + View
Fragaria x ananassa FAN15G1518 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 - View
Gossypium hirsutum Gohir.D01G193600 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D01 - View
Gossypium hirsutum Gohir.A01G204100 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) A01 - View
Glycine max Glyma.10G277502 PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) Gm10 - View
Glycine max Glyma.20G112100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm20 + View
Helianthus annuus HanXRQChr11g0341951 Probable ribosomal S17 family protein HanXRQChr11 - View
Hydrangea macrophylla Hma1.2p1_0457F.1_g156940 Hma1.2p1_0457F.1 - View
Lupinus albus Lalb_Chr25g0288131 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Lalb_Chr25 - View
Lotus japonicus Lj5g0019903 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr5 + View
Lonicera japonica Lj3P925T51 GWHAAZE00000003 - View
Lonicera japonica Lj1P1038T31 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_47160 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_2_105620 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_8_24360 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_8 + View
Malus domestica MD14G1033700 Ribosomal S17 family protein Chr14 + View
Malus domestica MD14G1026500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr14 + View
Medicago truncatula Medtr1g111670 pentatricopeptide (PPR) repeat protein chr1 - View
Nicotiana tabacum Nitab4.5_0005214g0050 Ribosomal protein S17e, Ribosomal protein S17e, conserved site Nitab4.5_0005214 - View
Olea europaea Oeu033281.1 scaffold279 + View
Oryza sativa ssp. japonica Os12g0156900 Pentatricopeptide repeat domain containing protein. chr12 + View
Oryza sativa ssp. japonica Os03g0644200 Pentatricopeptide repeat domain containing protein. chr03 - View
Petunia axillaris Peaxi162Scf00519g00054 40S ribosomal protein S17 Peaxi162Scf00519 - View
Petunia axillaris Peaxi162Scf00125g00044 40S ribosomal protein S17 Peaxi162Scf00125 - View
Punica granatum PGR142G0603 NC_045128.1 - View
Punica granatum PGR004G0724 NC_045131.1 - View
Punica granatum PGR044G1880 NC_045134.1 - View
Prunus persica Prupe.2G071000 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp02 - View
Papaver somniferum PSO339G0071 NC_039366.1 - View
Papaver somniferum PSO384G1813 NC_039368.1 + View
Papaver somniferum PSO384G0923 NC_039368.1 + View
Populus trichocarpa Potri.016G073750 PTHR10732//PTHR10732:SF2 - 40S RIBOSOMAL PROTEIN S17 // SUBFAMILY NOT NAMED Chr16 + View
Populus trichocarpa Potri.008G017300 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) Chr08 + View
Populus trichocarpa Potri.006G207500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr06 - View
Populus trichocarpa Potri.010G241100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 + View
Quercus lobata QL04p046945 4 + View
Rhododendron simsii Rhsim03G0097000 chr03 - View
Rhododendron simsii Rhsim13G0113500 chr13 + View
Salvia bowleyana SalBow5G1157 GWHASIU00000003 - View
Salvia bowleyana SalBow6G0550 GWHASIU00000002 - View
Salix brachista Sabra16G0126300 GWHAAZH00000016 + View
Salix brachista Sabra06G0159700 GWHAAZH00000006 - View
Salix brachista Sabra10G0188700 GWHAAZH00000010 + View
Salix brachista Sabra08G0010800 GWHAAZH00000008 + View
Simmondsia chinensis Sc09g0005190 GWHAASQ00000009 - View
Sechium edule Sed0002853 LG03 - View
Schrenkiella parvula Sp6g38030 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) ch6-6 - View
Schrenkiella parvula Sp6g23070 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch6-6 + View
Solanum pennellii Sopen11g002620 Ribosomal S17 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, intracellular | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e , Ribosomal protein S17e, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein Spenn-ch11 - View
Solanum pennellii Sopen05g033670 Ribosomal S17 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, intracellular | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e , Ribosomal protein S17e, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400023394 40S ribosomal protein S17 ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400007598 Pentatricopeptide repeat-containing protein ST4.03ch11 + View
Selenicereus undatus Hund06793 Scaffold_33676 + View
Trochodendron aralioides TAR633G0434 group2 - View
Trochodendron aralioides TAR623G0032 group7 - View
Trochodendron aralioides TAR636G2966 group1 + View
Trochodendron aralioides TAR369G1096 group18 + View
Theobroma cacao Thecc.10G115300 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_10 + View
Tripterygium wilfordii TWI53G0411 NC_052244.1 - View
Tripterygium wilfordii TWI38G0516 NC_052252.1 - View
Utricularia gibba unitig_46.g18640 unitig_46 + View
Vaccinium macrocarpon vmacro07265 Similar to PCMP-H32: Putative pentatricopeptide repeat-containing protein At3g23330 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro10319 Similar to PCMP-H38: Pentatricopeptide repeat-containing protein At5g48910 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0108 CM024071.1 - View
Vitis vinifera GSVIVG01034655001 chr13 + View
Zea mays Zm00001eb083670 Zm00001e008183 Putative pentatricopeptide repeat-containing protein 2 - View