Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc01g008970.4 RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* F4IIL5_ARATH) SL4.0ch01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.930 chr8 + View
Actinidia chinensis Actinidia37857 Lachesis_group5 + View
Avicennia marina MSTRG.19747 ScioBoG_25048_HRSCAF_25167 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RP4VSQ PTHR24012:SF490 - UBP1-ASSOCIATED PROTEIN 2C arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T9S3N5 PTHR24012:SF490 - UBP1-ASSOCIATED PROTEIN 2C arahy.Tifrunner.gnm1.Arahy.06 - View
Beta vulgaris EL10Ac3g07387 PTHR24012//PTHR24012:SF490 - FAMILY NOT NAMED // UBP1-ASSOCIATED PROTEIN 2C Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0029802 PREDICTED: UBP1-associated protein 2A-like [Nelumbo nucifera] Contig135 - View
Corylus avellana Haze_20361 Similar to UBA2B: UBP1-associated protein 2B (Arabidopsis thaliana OX%3D3702) 10 + View
Carica papaya Cpa.g.sc33.184 supercontig_33 - View
Chenopodium quinoa AUR62018470 UBA2B: UBP1-associated protein 2B C_Quinoa_Scaffold_4077 - View
Daucus carota DCAR_009108 hypothetical protein DCARv2_Chr3 - View
Erythranthe guttata Migut.N02397 scaffold_14 - View
Erythranthe guttata Migut.J01596 scaffold_10 - View
Glycine max Glyma.19G122900 PTHR24012:SF490 - UBP1-ASSOCIATED PROTEIN 2C Gm19 - View
Lupinus albus Lalb_Chr14g0365171 K12741 - heterogeneous nuclear ribonucleoprotein A1/A3 (HNRNPA1_3) Lalb_Chr14 + View
Lotus japonicus Lj1g0023973 PTHR24012:SF490 - UBP1-ASSOCIATED PROTEIN 2C chr1 + View
Medicago truncatula Medtr7g088140 RNA recognition motif, a.k.a. RRM, RBD protein chr7 - View
Nicotiana tabacum Nitab4.5_0000613g0180 RNA recognition motif domain, Nucleotide-binding, alpha-beta plait Nitab4.5_0000613 + View
Punica granatum PGR102G2783 NC_045129.1 + View
Populus trichocarpa Potri.016G023800 KOG0117//KOG0148 - Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) Chr16 + View
Striga asiatica SGA_v2.0_scaffold69G23210 scaffold69 - View
Salvia bowleyana SalBow6G5213 GWHASIU00000002 + View
Salvia bowleyana SalBow1G2394 GWHASIU00000001 - View
Salvia bowleyana SalBow6G0912 GWHASIU00000002 + View
Salix brachista Sabra16G0131200 GWHAAZH00000016 + View
Solanum pennellii Sopen01g004460 encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3-UTRs and contributing to the stabilization of mRNAs in the nucleus. | UBP1-associated protein 2A (UBA2A) | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein . Spenn-ch01 - View
Solanum pennellii Sopen10g031830 RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: leaf senescence, cell death, ethylene biosynthetic process, defense response | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: UBP1-associated protein 2A Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400022692 RNA-binding protein AKIP1 ST4.03ch01 - View
Solanum tuberosum PGSC0003DMG400028209 Heterogeneous nuclear ribonucleoprotein A1 ST4.03ch10 + View
Trochodendron aralioides TAR369G0798 group18 + View
Trochodendron aralioides TAR623G0035 group7 + View
Vigna mungo VMungo1383G3564 CM024070.1 - View