Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G11880 LG-3 + View
Acer truncatum Atru.chr2.3833 chr2 + View
Arabidopsis lyrata AL8G31550 scaffold_8 + View
Arabidopsis lyrata AL7G26310 scaffold_7 + View
Avicennia marina MSTRG.15807 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.7014 ScioBoG_102840_HRSCAF_103099 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4EQU0E PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1WFS8V PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.XK4UQG PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FRP7IX PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT4G26580 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G55970.2)%3B Has 9396 Blast hits to 9372 proteins in 282 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2389%3B Fungi - 691%3B Plants - 4936%3B Viruses - 28%3B Other Eukaryotes - 1352 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G55970.2). Chr4 - View
Arabidopsis thaliana AT5G55970 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%2C 4 leaf senescence stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2)%3B Has 9514 Blast hits to 9491 proteins in 268 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2536%3B Fungi - 688%3B Plants - 4940%3B Viruses - 19%3B Other Eukaryotes - 1331 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: LP.06 six leaves visible%2C LP.04 four leaves visible%2C 4 anthesis%2C 4 leaf senescence stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G26580.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB08g35963 ChrB08 + View
Brassica carinata BcaNung02402 Contig866 + View
Brassica carinata BcaC04g20176 ChrC04 - View
Brassica napus A03p13740 A03 - View
Brassica napus A01p17820 A01 - View
Brassica napus C03p16130 C03 - View
Brassica napus C01p22610 C01 - View
Brassica napus C09p46960 C09 + View
Brassica napus A10p13200 A10 + View
Brassica oleracea BolC3t14038H C3 - View
Brassica oleracea BolC9t57544H C9 + View
Brassica rapa BraA03t10677Z A03 - View
Brassica rapa BraA10t43418Z A10 + View
Brassica rapa BraA01t01738Z A01 - View
Beta vulgaris EL10Ac4g07538 PTHR14155//PTHR14155:SF83 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0022326 PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera] Chr7 - View
Cannabis sativa CANSAT11G1670 NC_044377.1 - View
Cicer arietinum L. Ca_12449_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_06415_v3 Ca_LG2_v3 + View
Corylus avellana Haze_09861 Similar to At4g11680: E3 ubiquitin-protein ligase At4g11680 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g15260 RING/U-box superfamily protein chr5 + View
Citrus clementina Ciclev10008862m.g scaffold_1 + View
Cardamine hirsuta CARHR234160 Ring finger protein, putative Chr7 - View
Cardamine hirsuta CARHR269340 Ring finger protein, putative Chr8 + View
Carya illinoinensis CiPaw.11G206600 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr11 + View
Carya illinoinensis CiPaw.12G140400 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr12 + View
Citrullus lanatus ClCG09G021510 RING finger protein CG_Chr09 + View
Cucumis melo MELO3C024965.2 E3 ubiquitin-protein ligase At4g11680-like chr01 - View
Corchorus olitorius COL.COLO4_07728 E3 ubiquitin-protein ligase AWUE01013455.1 - View
Carica papaya Cpa.g.sc12.110 supercontig_12 - View
Capsella rubella Carub.0008s1631 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN scaffold_8 + View
Capsella rubella Carub.0007s1430 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN scaffold_7 + View
Davidia involucrata Dinv10360 GWHABJS00000001 + View
Durio zibethinus Duzib213G0973 NW_019167993.1 - View
Durio zibethinus Duzib170G0325 NW_019167871.1 - View
Eucalyptus grandis Eucgr.F02028 Chr06 - View
Erythranthe guttata Migut.M01632 scaffold_13 + View
Eutrema salsugineum Thhalv10014037m.g PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN scaffold_2 - View
Eutrema salsugineum Thhalv10025652m.g PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN scaffold_1 + View
Fragaria x ananassa FAN21G1085 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb3-2 - View
Fragaria x ananassa FAN25G1589 PTHR14155//PTHR14155:SF83 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb3-1 + View
Fragaria x ananassa FAN16G1331 PTHR14155//PTHR14155:SF83 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb3-3 - View
Fragaria vesca FvH4_3g42300 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Fvb3 - View
Gossypium hirsutum Gohir.D01G078000 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN D01 + View
Gossypium hirsutum Gohir.A01G093500 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN A01 + View
Gossypium hirsutum Gohir.A13G131000 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN A13 - View
Gossypium hirsutum Gohir.D13G134300 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN D13 - View
Glycine max Glyma.08G332300 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Gm08 + View
Glycine max Glyma.14G011800 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Gm14 - View
Glycine max Glyma.18G074600 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Gm18 - View
Glycine max Glyma.02G302400 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Gm02 + View
Gossypium raimondii Gorai.002G102600 Chr02 + View
Gossypium raimondii Gorai.013G150600 Chr13 - View
Hydrangea macrophylla Hma1.2p1_1094F.1_g256370 Hma1.2p1_1094F.1 - View
Lupinus albus Lalb_Chr15g0082281 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Lalb_Chr15 + View
Lupinus albus Lalb_Chr10g0107511 PTHR14155//PTHR14155:SF83 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN Lalb_Chr10 + View
Lotus japonicus Lj6g0021176 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN chr6 - View
Lotus japonicus LjContig00081g0000855 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Contig00081 + View
Lonicera japonica Lj8A180T95 GWHAAZE00000008 + View
Lonicera japonica Lj1A894T47 GWHAAZE00000001 + View
Magnolia biondii MBI15_g38529_MAGBIO AED:0.03 Chr15 - View
Malus domestica MD03G1034800 RING/U-box superfamily protein Chr03 + View
Malus domestica MD11G1036700 RING/U-box superfamily protein Chr11 + View
Manihot esculenta Manes.03G143600 Chromosome03 + View
Manihot esculenta Manes.15G057300 Chromosome15 - View
Medicago truncatula Medtr5g096410 E3 ubiquitin protein ligase RIE1-like protein, putative chr5 + View
Nelumbo nucifera Nn1g07748 chr1 - View
Nicotiana tabacum Nitab4.5_0003130g0080 Unknown Nitab4.5_0003130 - View
Nicotiana tabacum Nitab4.5_0000152g0420 Unknown Nitab4.5_0000152 - View
Nicotiana tabacum Nitab4.5_0000163g0060 Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type Nitab4.5_0000163 - View
Olea europaea Oeu049419.1 chr6 - View
Olea europaea Oeu017993.1 chr21 + View
Petunia axillaris Peaxi162Scf00006g00529 RING/U-box superfamily protein Peaxi162Scf00006 + View
Petunia axillaris Peaxi162Scf00232g00026 RING/U-box superfamily protein Peaxi162Scf00232 + View
Punica granatum PGR083G2092 NC_045133.1 - View
Prunus persica Prupe.6G028000 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Pp06 + View
Pisum sativum Psat2g006520 Zinc finger + C3HC4 RING-type chr2LG1 - View
Pisum sativum Psat5g167040 Zinc finger + C3HC4 RING-type chr5LG3 + View
Papaver somniferum PSO541G0478 NC_039363.1 + View
Phaseolus vulgaris Phvul.006G059224 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Chr06 + View
Quercus lobata QL08p003197 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0075651 RcHm_v2.0_Chr5 - View
Striga asiatica SGA_v2.0_scaffold171G38845 scaffold171 - View
Salix brachista Sabra16G0243900 GWHAAZH00000016 + View
Simmondsia chinensis Sc03g0011560 GWHAASQ00000003 - View
Sechium edule Sed0004744 LG07 - View
Sechium edule Sed0022976 LG04 - View
Schrenkiella parvula Sp7g24540 PTHR14155:SF83 - RING/U-BOX DOMAIN-CONTAINING PROTEIN ch7-4 - View
Schrenkiella parvula Sp6g17820 PTHR14155//PTHR14155:SF83 - RING FINGER DOMAIN-CONTAINING // RING/U-BOX DOMAIN-CONTAINING PROTEIN ch6-6 + View
Solanum pennellii Sopen07g034000 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | LOCATED IN: chloroplast | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, 4 leaf senescence stage, petal differentiation and expansion stage | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch07 + View
Selenicereus undatus Hund23077 Scaffold_33680 + View
Trochodendron aralioides TAR629G2194 group0 - View
Trochodendron aralioides TAR627G0087 group6 + View
Theobroma cacao Thecc.07G008200 RING/U-box domain-containing protein Chromosome_7 - View
Tarenaya hassleriana THA.LOC104813456 E3 ubiquitin-protein ligase At4g11680-like NW_010965373.1 + View
Tarenaya hassleriana THA.LOC104817714 E3 ubiquitin-protein ligase At4g11680 NW_010966021.1 + View
Trifolium pratense TPR.G1258 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI39G1098 NC_052250.1 - View
Tripterygium wilfordii TWI38G2121 NC_052252.1 + View
Utricularia gibba unitig_62.g23311 unitig_62 + View
Vaccinium macrocarpon vmacro11613 Similar to At4g11680: E3 ubiquitin-protein ligase At4g11680 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0540G0262 CM024075.1 - View
Vitis vinifera GSVIVG01014737001 chr19 + View