Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc03g116670.3 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* F4K464_ARATH) SL4.0ch03 + View
Solyc07g008210.4 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *-* F4K464_ARATH) SL4.0ch07 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G420 LG-4 - View
Acer truncatum Atru.chr1.2982 chr1 + View
Acer truncatum Atru.chr7.2423 chr7 + View
Actinidia chinensis Actinidia08800 Lachesis_group2 + View
Actinidia chinensis Actinidia15989 Lachesis_group9 + View
Actinidia chinensis Actinidia26389 Lachesis_group25 - View
Arabidopsis lyrata AL2G41400 scaffold_2 + View
Avicennia marina MSTRG.11137 ScioBoG_14204_HRSCAF_14270 + View
Avicennia marina MSTRG.22740 ScioBoG_3703_HRSCAF_3719 + View
Amaranthus hybridus Ah.01g020680 AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LW11C9 PTHR26312//PTHR26312:SF75//PTHR37706//PTHR37706:SF1 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED // FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MSJ11 arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C6FBGW PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T4Y60T PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UKR13J PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT1G80130 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: response to oxidative stress%3B LOCATED IN: membrane%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G20190.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC03g16002 ChrC03 + View
Brassica carinata BcaC08g47574 ChrC08 - View
Brassica carinata BcaB05g25297 ChrB05 + View
Brassica napus C06p54220 C06 + View
Brassica napus A07p45380 A07 + View
Brassica oleracea BolC6t40435H C6 + View
Brassica oleracea BolC2t09769H C2 + View
Beta vulgaris EL10Ac8g18677 PF13431 - Tetratricopeptide repeat (TPR_17) Chr8_EL10_PGA_scaffold4 + View
Camellia sinensis var. sinensis CSS0008588 PsbD mRNA maturation factor Nac2, chloroplastic [Gossypium arboreum] Chr12 - View
Capsicum annuum CAN.G1503.5 PGAv.1.6.scaffold1503 + View
Capsicum annuum CAN.G407.90 PGAv.1.6.scaffold407 - View
Cannabis sativa CANSAT56G4355 NC_044371.1 + View
Cicer arietinum L. Ca_21670_v3 Ca_LG7_v3 - View
Cicer arietinum L. Ca_01059_v3 Ca_LG1_v3 - View
Corylus avellana Haze_16546 Protein of unknown function 11 + View
Coffea canephora Cc06_g08340 Putative Tetratricopeptide repeat (TPR)-like superfamily protein chr6 - View
Coffea canephora Cc04_g04320 Putative Tetratricopeptide repeat (TPR)-like superfamily protein chr4 + View
Citrus clementina Ciclev10009189m.g scaffold_1 - View
Citrus clementina Ciclev10025712m.g scaffold_7 + View
Citrus clementina Ciclev10009202m.g scaffold_1 - View
Cardamine hirsuta CARHR074370 Tetratricopeptide repeat (TPR)-like superfamily protein Chr2 + View
Carya illinoinensis CiPaw.01G246800 PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED Chr01 + View
Carya illinoinensis CiPaw.07G223000 PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED Chr07 + View
Carya illinoinensis CiPaw.02G156600 PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED Chr02 + View
Citrullus lanatus ClCG11G003130 Tetratricopeptide repeat (TPR)-like superfamily protein LENGTH=290 CG_Chr11 + View
Citrullus lanatus ClCG09G002900 Tetratricopeptide repeat (TPR)-like superfamily protein LENGTH=305 CG_Chr09 + View
Citrullus lanatus ClCG05G016900 Tetratricopeptide repeat (TPR)-like superfamily protein LENGTH=238 CG_Chr05 - View
Citrullus lanatus ClCG06G011260 Tetratricopeptide repeat (TPR)-like superfamily protein LENGTH=290 CG_Chr06 + View
Cucumis melo MELO3C023418.2 Tetratricopeptide repeat (TPR)-like superfamily protein chr01 - View
Cucumis melo MELO3C004496.2 Tetratricopeptide repeat (TPR)-like superfamily protein chr05 - View
Corchorus olitorius COL.COLO4_12956 Tetratricopeptide-like helical AWUE01014983.1 + View
Chenopodium quinoa AUR62016344 Protein of unknown function C_Quinoa_Scaffold_3514 - View
Chenopodium quinoa AUR62031512 Protein of unknown function C_Quinoa_Scaffold_1206 - View
Chenopodium quinoa AUR62012392 Protein of unknown function C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62011526 Protein of unknown function C_Quinoa_Scaffold_3333 - View
Capsella rubella Carub.0002s2739 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED scaffold_2 + View
Cucumis sativus L. CsaV3_7G032430 Tetratricopeptide repeat (TPR)-like superfamily protein chr7 - View
Cucumis sativus L. CsaV3_2G002950 Tetratricopeptide repeat protein chr2 + View
Davidia involucrata Dinv38116 GWHABJS00000006 - View
Davidia involucrata Dinv30598 GWHABJS00000019 - View
Davidia involucrata Dinv36512 GWHABJS00000001 - View
Durio zibethinus Duzib168G1198 NW_019168159.1 - View
Durio zibethinus Duzib187G1121 NW_019167860.1 - View
Durio zibethinus Duzib150G0453 NW_019167882.1 + View
Durio zibethinus Duzib235G1087 NW_019167982.1 - View
Durio zibethinus Duzib150G1231 NW_019167882.1 - View
Durio zibethinus Duzib187G0727 NW_019167860.1 + View
Durio zibethinus Duzib168G0350 NW_019168159.1 - View
Durio zibethinus Duzib160G0284 NW_019168015.1 - View
Erigeron canadensis ECA232G2885 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.C04230 Chr03 + View
Eucalyptus grandis Eucgr.F03869 Chr06 + View
Erythranthe guttata Migut.D01072 scaffold_4 + View
Erythranthe guttata Migut.I00772 scaffold_9 - View
Eutrema salsugineum Thhalv10018894m.g PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED scaffold_9 - View
Fragaria x ananassa FAN05G3945 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Fvb6-3 + View
Fragaria vesca FvH4_6g29850 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Fvb6 - View
Gossypium hirsutum Gohir.D05G127200 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED D05 + View
Gossypium hirsutum Gohir.D05G016700 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED D05 - View
Gossypium hirsutum Gohir.A05G015600 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED A05 - View
Gossypium hirsutum Gohir.A06G098216 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED A06 + View
Gossypium hirsutum Gohir.A07G028000 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED A07 + View
Gossypium hirsutum Gohir.A06G114700 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED A06 + View
Gossypium hirsutum Gohir.A05G126300 PF13431 - Tetratricopeptide repeat (TPR_17) A05 + View
Gossypium hirsutum Gohir.D07G032100 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED D07 + View
Gossypium hirsutum Gohir.D06G100100 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED D06 + View
Glycine max Glyma.15G007900 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Gm15 - View
Glycine max Glyma.08G212300 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Gm08 + View
Glycine max Glyma.13G165800 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Gm13 - View
Glycine max Glyma.07G030500 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Gm07 - View
Glycine max Glyma.13G365300 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Gm13 + View
Gossypium raimondii Gorai.009G131300 Chr09 + View
Gossypium raimondii Gorai.010G115000 Chr10 + View
Gossypium raimondii Gorai.009G016900 Chr09 - View
Gossypium raimondii Gorai.001G033500 Chr01 + View
Hydrangea macrophylla Hma1.2p1_0018F.1_g012310 Hma1.2p1_0018F.1 - View
Lupinus albus Lalb_Chr25g0279341 PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED Lalb_Chr25 - View
Lupinus albus Lalb_Chr13g0301771 PTHR26312//PTHR26312:SF75 - FAMILY NOT NAMED // F18B13.21 PROTEIN-RELATED Lalb_Chr13 - View
Lotus japonicus Lj3g0019519 PF13432 - Tetratricopeptide repeat (TPR_16) chr3 + View
Lotus japonicus Lj4g0003692 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED chr4 - View
Lotus japonicus Lj3g0010604 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED chr3 + View
Lonicera japonica Lj5A71G74 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_5_95540 Lsat_1_v8_lg_5 + View
Lactuca sativa Lsat_1_v5_gn_7_107661 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Lsat_1_v8_lg_7 + View
Magnolia biondii MBI01_g36596_MAGBIO AED:0.02 Chr01 + View
Magnolia biondii MBI04_g29347_MAGBIO AED:0.02 Chr04 + View
Malus domestica MD02G1030000 Tetratricopeptide repeat (TPR)-like superfamily protein Chr02 - View
Malus domestica MD17G1210200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr17 + View
Manihot esculenta Manes.03G015000 Chromosome03 - View
Manihot esculenta Manes.04G113400 Chromosome04 - View
Manihot esculenta Manes.11G056100 Chromosome11 + View
Manihot esculenta Manes.14G133300 Chromosome14 + View
Manihot esculenta Manes.06G057500 Chromosome06 - View
Medicago truncatula Medtr2g103795 TPR repeat protein chr2 + View
Medicago truncatula Medtr4g010250 TPR repeat protein chr4 - View
Nelumbo nucifera Nn2g12060 chr2 + View
Nicotiana tabacum Nitab4.5_0000373g0030 Tetratricopeptide TPR1, Tetratricopeptide repeat-containing domain, Tetratricopeptide-like helical Nitab4.5_0000373 + View
Olea europaea Oeu042101.2 chr10 - View
Petunia axillaris Peaxi162Scf00332g00731 Tetratricopeptide repeat (TPR)-like superfamily protein Peaxi162Scf00332 - View
Punica granatum PGR102G1074 NC_045129.1 + View
Punica granatum PGR142G2496 NC_045128.1 - View
Prunus persica Prupe.3G085500 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Pp03 + View
Pisum sativum Psat5g302240 Tetratricopeptide repeat chr5LG3 + View
Populus trichocarpa Potri.006G254300 Chr06 + View
Populus trichocarpa Potri.018G130100 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Chr18 - View
Phaseolus vulgaris Phvul.005G177800 PTHR26312:SF75 - F18B13.21 PROTEIN-RELATED Chr05 + View
Phaseolus vulgaris Phvul.010G155600 Chr10 + View
Quercus lobata QL05p029561 5 + View
Rhododendron simsii Rhsim12G0191600 chr12 - View
Striga asiatica SGA_v2.0_scaffold5G02688 scaffold5 + View
Striga asiatica SGA_v2.0_scaffold37G14772 scaffold37 - View
Salvia bowleyana SalBow6G3359 GWHASIU00000002 + View
Salvia bowleyana SalBow6G2738 GWHASIU00000002 - View
Salvia bowleyana SalBow2G3236 GWHASIU00000007 - View
Salix brachista Sabra06G0198700 GWHAAZH00000006 + View
Salix brachista Sabra18G0110600 GWHAAZH00000018 - View
Salix brachista Sabra06G0050700 GWHAAZH00000006 - View
Simmondsia chinensis Sc12g0008720 GWHAASQ00000012 + View
Sechium edule Sed0024066 LG07 - View
Sechium edule Sed0013088 LG13 - View
Sechium edule Sed0018319 LG09 - View
Sechium edule Sed0022395 LG12 - View
Solanum pennellii Sopen06g025400 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen03g035580 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400000618 Conserved gene of unknown function ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400028535 Conserved gene of unknown function ST4.03ch06 + View
Selenicereus undatus Hund09255 Scaffold_33676 + View
Selenicereus undatus Hund00522 Scaffold_33678 - View
Trochodendron aralioides TAR636G0973 group1 - View
Trochodendron aralioides TAR626G1723 group3 + View
Trochodendron aralioides TAR383G0227 group10 - View
Trochodendron aralioides TAR625G1235 group4 - View
Theobroma cacao Thecc.06G022200 Chromosome_6 + View
Trifolium pratense TPR.G37230 Tp57577_TGAC_v2_LG7 - View
Trifolium pratense TPR.G38609 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI34G1251 NC_052235.1 - View
Tripterygium wilfordii TWI63G1536 NC_052240.1 + View
Tripterygium wilfordii TWI18G0102 NC_052241.1 + View
Utricularia gibba unitig_52.g17457 unitig_52 + View
Vaccinium macrocarpon vmacro16901 Protein of unknown function chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06134 Protein of unknown function chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1457 CM024079.1 + View
Vigna mungo VMungo1215G2575 CM024074.1 + View
Vigna mungo VMungo0331G1536 CM024078.1 - View
Vitis vinifera GSVIVG01015550001 chr11 + View
Vitis vinifera GSVIVG01017324001 chr9 + View