Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc05g011810.4 bHLH transcription factor 040 SL4.0ch05 + View
Solyc06g069370.4 bHLH transcription factor 046 SL4.0ch06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3740 LG-2 + View
Acer truncatum Atru.chr11.1550 chr11 + View
Actinidia chinensis Actinidia19903 Lachesis_group10 - View
Actinidia chinensis Actinidia31927 Lachesis_group15 - View
Actinidia chinensis Actinidia04791 Lachesis_group1 - View
Arabidopsis lyrata AL2G28060 scaffold_2 + View
Avicennia marina MSTRG.783 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.2288 ScioBoG_102834_HRSCAF_103055 + View
Amaranthus hybridus Ah.11g047380 Transcription factor BIM1 (BES1-interacting Myc-like protein 1) (Basic helix-loop-helix protein 46) (AtbHLH46) (bHLH 46) (Transcription factor EN 126) (bHLH transcription factor bHLH046) AmaHy_arrow1_Scaffold_11 + View
Amaranthus hybridus Ah.16g100970 AmaHy_arrow1_Scaffold_16 + View
Aquilegia oxysepala Aqoxy3G00556 CHR03 - View
Aquilegia oxysepala Aqoxy3G03756 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3TU9DB PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix (bHLH) family protein BIM1 (BES1-INTERACTING MYC-LIKE 1)%2C involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BIM1%3B FUNCTIONS IN: protein binding%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: brassinosteroid mediated signaling pathway%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1)%3B Has 2460 Blast hits to 2449 proteins in 184 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 308%3B Fungi - 82%3B Plants - 2059%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink). BIM1%3B FUNCTIONS IN: protein binding%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: brassinosteroid mediated signaling pathway%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 (TAIR:AT1G69010.1). Chr5 - View
Arabidopsis thaliana AT1G69010 BES1-interacting Myc-like protein 2 Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2)%2C a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings. BES1-interacting Myc-like protein 2 (BIM2)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: dTDP-rhamnose biosynthetic process%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G08130.3)%3B Has 2743 Blast hits to 2732 proteins in 181 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 222%3B Fungi - 63%3B Plants - 2453%3B Viruses - 0%3B Other Eukaryotes - 5 (source: NCBI BLink). Chr1 + View
Brassica napus A02p15560 A02 + View
Brassica napus A07p35410 A07 + View
Brassica napus C06p40830 C06 - View
Brassica oleracea BolC6t39350H C6 + View
Brassica rapa BraA07t31132Z A07 + View
Beta vulgaris EL10Ac6g14666 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0050324 unnamed protein product [Vitis vinifera] Chr2 - View
Camellia sinensis var. sinensis CSS0026070 hypothetical protein CISIN_1g019960mg [Citrus sinensis] Chr6 + View
Capsicum annuum CAN.G587.63 PGAv.1.6.scaffold587 - View
Cannabis sativa CANSAT64G1735 NC_044379.1 + View
Cicer arietinum L. Ca_21751_v3 Ca_LG7_v3 + View
Corylus avellana Haze_11854 Similar to BIM2: Transcription factor BIM2 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc04_g08190 Putative Transcription factor BIM1 chr4 + View
Coffea canephora Cc07_g04540 Putative Transcription factor BIM2 chr7 - View
Coffea canephora Cc11_g11510 Transcription factor BIM2 chr11 + View
Citrus clementina Ciclev10032020m.g scaffold_4 + View
Citrus clementina Ciclev10020248m.g scaffold_3 - View
Ceratophyllum demersum CDE01G0595 11 - View
Carpinus fangiana Cfa008842 Cfa03 + View
Cardamine hirsuta CARHR061880 BHLH transcription factor Chr2 + View
Carya illinoinensis CiPaw.03G082400 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Chr03 + View
Carya illinoinensis CiPaw.05G121000 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr05 + View
Carya illinoinensis CiPaw.06G095300 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr06 - View
Citrullus lanatus ClCG08G010620 BHLH transcription factor CG_Chr08 - View
Citrullus lanatus ClCG04G011530 Transcription factor BIM1, putative CG_Chr04 + View
Cucumis melo MELO3C002057.2 transcription factor BIM1-like isoform X2 chr12 + View
Cucumis melo MELO3C011399.2 LOW QUALITY PROTEIN: transcription factor BIM2 chr03 - View
Corchorus olitorius COL.COLO4_27783 hypothetical protein AWUE01019685.1 + View
Chenopodium quinoa AUR62007865 BIM2: Transcription factor BIM2 C_Quinoa_Scaffold_2646 - View
Chenopodium quinoa AUR62003052 BIM2: Transcription factor BIM2 C_Quinoa_Scaffold_1000 - View
Capsella rubella Carub.0002s1562 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 scaffold_2 + View
Capsella rubella Carub.0006s0702 scaffold_6 - View
Cucumis sativus L. CsaV3_1G006280 transcription factor BIM1-like isoform X2 chr1 - View
Daucus carota DCAR_025458 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv34016 GWHABJS00000008 + View
Davidia involucrata Dinv15579 GWHABJS00000018 - View
Durio zibethinus Duzib084G1433 NW_019167827.1 - View
Durio zibethinus Duzib251G0026 NW_019167971.1 + View
Durio zibethinus Duzib205G1049 NW_019168381.1 - View
Durio zibethinus Duzib248G1444 NW_019168048.1 - View
Durio zibethinus Duzib211G0143 NW_019168049.1 - View
Durio zibethinus Duzib268G1711 NW_019168270.1 + View
Durio zibethinus Duzib068G1269 NW_019167838.1 - View
Erigeron canadensis ECA233G2616 Conyza_canadensis_scaffold:1 - View
Eucalyptus grandis Eucgr.B03113 Chr02 + View
Erythranthe guttata Migut.H00581 scaffold_8 + View
Erythranthe guttata Migut.L01158 scaffold_12 + View
Eutrema salsugineum Thhalv10018889m.g PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 scaffold_9 - View
Fragaria x ananassa FAN12G1039 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Fvb4-3 - View
Fragaria x ananassa FAN07G0900 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Fvb4-4 - View
Fragaria x ananassa FAN14G2506 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Fvb6-1 - View
Fragaria vesca FvH4_4g29230 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Fvb4 + View
Gossypium hirsutum Gohir.D13G085900 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 D13 - View
Gossypium hirsutum Gohir.A12G159200 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 A12 + View
Gossypium hirsutum Gohir.D12G162500 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 D12 + View
Glycine max Glyma.01G066600 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Gm01 - View
Glycine max Glyma.02G123400 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Gm02 - View
Glycine max Glyma.05G017800 PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Gm05 + View
Gossypium raimondii Gorai.008G175100 Chr08 + View
Gossypium raimondii Gorai.009G327300 Chr09 - View
Gossypium raimondii Gorai.013G098000 Chr13 - View
Lupinus albus Lalb_Chr10g0092671 PTHR12565//PTHR12565:SF85 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM3 Lalb_Chr10 - View
Lupinus albus Lalb_Chr07g0178441 PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Lalb_Chr07 - View
Lupinus albus Lalb_Chr10g0099231 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Lalb_Chr10 - View
Lupinus albus Lalb_Chr12g0197401 PTHR12565:SF153 - TRANSCRIPTION FACTOR BIM1 Lalb_Chr12 - View
Lupinus albus Lalb_Chr13g0302651 PTHR12565//PTHR12565:SF153 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM1 Lalb_Chr13 + View
Lupinus albus Lalb_Chr17g0341501 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Lalb_Chr17 - View
Lotus japonicus Lj1g0024467 PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 chr1 - View
Lotus japonicus Lj2g0012609 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 chr2 - View
Lonicera japonica Lj3A1026T82 GWHAAZE00000003 + View
Lonicera japonica Lju361A7T17 GWHAAZE00000081 - View
Malus domestica MD17G1066600 BES1-interacting Myc-like protein 2 Chr17 - View
Malus domestica MD14G1217100 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr14 - View
Malus domestica MD16G1055100 BES1-interacting Myc-like protein 2 Chr16 + View
Malus domestica MD06G1206200 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr06 - View
Malus domestica MD13G1056100 BES1-interacting Myc-like protein 2 Chr13 + View
Manihot esculenta Manes.14G089600 Chromosome14 - View
Manihot esculenta Manes.06G079000 Chromosome06 + View
Manihot esculenta Manes.01G104200 Chromosome01 - View
Medicago truncatula Medtr4g110040 transcription factor BIM2-like protein chr4 - View
Olea europaea Oeu048116.1 chr12 - View
Petunia axillaris Peaxi162Scf00013g00838 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00013 - View
Petunia axillaris Peaxi162Scf00188g01023 Unknown protein Peaxi162Scf00188 + View
Punica granatum PGR102G1812 NC_045129.1 - View
Prunus persica Prupe.5G210500 Pp05 - View
Prunus persica Prupe.1G294200 Pp01 - View
Populus trichocarpa Potri.008G112000 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr08 - View
Populus trichocarpa Potri.010G137600 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 Chr10 + View
Phaseolus vulgaris Phvul.003G181900 Chr03 + View
Phaseolus vulgaris Phvul.003G037600 PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Chr03 + View
Rosa chinensis RcHm_v2.0_Chr4g0437281 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim08G0077900 chr08 - View
Rhododendron simsii Rhsim12G0071100 chr12 + View
Striga asiatica SGA_v2.0_scaffold287G47190 scaffold287 - View
Striga asiatica SGA_v2.0_scaffold36G14494 scaffold36 - View
Striga asiatica SGA_v2.0_scaffold16G07829 scaffold16 - View
Salvia bowleyana SalBow2G0832 GWHASIU00000007 - View
Salix brachista Sabra10G0106100 GWHAAZH00000010 + View
Simmondsia chinensis Sc04g0007320 GWHAASQ00000004 + View
Sechium edule Sed0015941 LG03 - View
Sechium edule Sed0015295 LG06 - View
Sechium edule Sed0008386 LG01 + View
Schrenkiella parvula Sp5g24120 PTHR12565//PTHR12565:SF123 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // TRANSCRIPTION FACTOR BIM2 ch5-6 + View
Solanum pennellii Sopen04g001260 BES1-interacting Myc-like protein 2 (BIM2) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch04 + View
Solanum pennellii Sopen05g006570 BES1-interacting Myc-like protein 2 (BIM2) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: dTDP-rhamnose biosynthetic process, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch05 + View
Solanum pennellii Sopen06g026630 Arabidopsis thaliana basic helix-loop-helix (bHLH) family protein involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). | BIM1 | FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: brassinosteroid mediated signaling pathway, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: BES1-interacting Myc-like protein 2 . Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400001919 BHLH domain class transcription factor ST4.03ch00 + View
Solanum tuberosum PGSC0003DMG400019654 BHLH domain class transcription factor ST4.03ch05 - View
Selenicereus undatus Hund02542 Scaffold_33678 + View
Selenicereus undatus Hund25152 Scaffold_3410 + View
Selenicereus undatus Hund05817 Scaffold_19641 + View
Trochodendron aralioides TAR371G0854 group13 - View
Trochodendron aralioides TAR374G1509 group12 - View
Trochodendron aralioides TAR629G1145 group0 + View
Theobroma cacao Thecc.03G109700 Transcription factor BIM1 Chromosome_3 - View
Theobroma cacao Thecc.02G321700 BES1-interacting Myc-like protein 2 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104821989 transcription factor BIM2 NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104818360 transcription factor BIM1 isoform X1 NW_010966092.1 - View
Trifolium pratense TPR.G1979 Tp57577_TGAC_v2_LG5 + View
Tripterygium wilfordii TWI32G0276 NC_052254.1 - View
Utricularia gibba unitig_699.g19904 unitig_699 + View
Vaccinium macrocarpon vmacro01295 Similar to BIM2: Transcription factor BIM2 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01036533001 chr14 + View
Vitis vinifera GSVIVG01008164001 chr17 + View