Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc02g021235.1 Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *-* A0A1U8FCX0_CAPAN) SL4.0ch02 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL4G30340 scaffold_4 + View
Amaranthus hybridus Ah.07g204930 AmaHy_arrow1_Scaffold_7 + View
Aquilegia oxysepala Aqoxy4G00106 CHR04 - View
Arabidopsis thaliana AT2G34370 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G29710.1)%3B Has 20194 Blast hits to 10208 proteins in 162 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 12%3B Fungi - 23%3B Plants - 20031%3B Viruses - 0%3B Other Eukaryotes - 128 (source: NCBI BLink). Chr2 + View
Brassica rapa BraA03t13635Z A03 + View
Brassica rapa BraA06t27458Z A06 - View
Brassica rapa BraA05t20073Z A05 - View
Corylus avellana Haze_13549 Similar to PCMP-E95: Pentatricopeptide repeat-containing protein At3g22150, chloroplastic (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc00_g30210 Mannan endo-1,4-beta-mannosidase 5 chr0 + View
Cardamine hirsuta CARHR128480 Pentatricopeptide repeat-containing protein Chr4 + View
Citrullus lanatus ClCG03G006600 Pentatricopeptide repeat protein CG_Chr03 + View
Cucumis melo MELO3C035706.2 Pentatricopeptide repeat-containing protein chr12 + View
Carica papaya Cpa.g.sc17.169 supercontig_17 - View
Capsella rubella Carub.0004s1604 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_4 + View
Erigeron canadensis ECA236G3780 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.E02385 Chr05 - View
Erythranthe guttata Migut.M01869 scaffold_13 + View
Eutrema salsugineum Thhalv10017960m.g PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_10 + View
Fragaria x ananassa FAN11G3040 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-4 + View
Gossypium hirsutum Gohir.D10G036200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D10 - View
Gossypium hirsutum Gohir.D10G039700 K07441 - beta-1,4-N-acetylglucosaminyltransferase (ALG14) D10 + View
Glycine max Glyma.12G009800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm12 + View
Gossypium raimondii Gorai.011G038100 Chr11 - View
Gossypium raimondii Gorai.011G041800 Chr11 + View
Magnolia biondii MBI10_g21112_MAGBIO AED:0.33 Chr10 + View
Manihot esculenta Manes.17G073400 Chromosome17 - View
Nelumbo nucifera Nn4g26526 chr4 - View
Nicotiana tabacum Nitab4.5_0001655g0120 Pentatricopeptide repeat Nitab4.5_0001655 - View
Nicotiana tabacum Nitab4.5_0001040g0060 Pentatricopeptide repeat Nitab4.5_0001040 - View
Phaseolus vulgaris Phvul.006G162500 Chr06 + View
Rhododendron simsii Rhsim02G0194600 chr02 - View
Schrenkiella parvula Sp7g15880 K07441 - beta-1,4-N-acetylglucosaminyltransferase (ALG14) ch7-4 + View
Schrenkiella parvula Sp4g16670 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch4-6 + View
Solanum pennellii Sopen02g019790 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400008304 Pentatricopeptide repeat-containing protein ST4.03ch02 - View