Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G10660 LG-4 - View
Aethionema arabicum Aa31LG9G1380 LG-9 - View
Actinidia chinensis Actinidia06031 Lachesis_group11 + View
Arabidopsis lyrata AL7G49740 scaffold_7 - View
Avicennia marina MSTRG.23998 ScioBoG_3895_HRSCAF_3912 + View
Avicennia marina MSTRG.3303 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.15505 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.13379 ScioBoG_18778_HRSCAF_18863 - View
Arabidopsis thaliana AT5G40250 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1)%3B Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2235%3B Fungi - 712%3B Plants - 5071%3B Viruses - 76%3B Other Eukaryotes - 1332 (source: NCBI BLink). Chr5 + View
Brassica napus C06p18980 C06 + View
Brassica oleracea BolC6t37099H C6 + View
Brassica rapa BraA07t29722Z A07 + View
Camellia sinensis var. sinensis CSS0038504 PREDICTED: RING-H2 finger protein ATL46 [Nelumbo nucifera] Chr6 - View
Camellia sinensis var. sinensis CSS0012672 PREDICTED: RING-H2 finger protein ATL56-like [Vitis vinifera] Chr2 + View
Camellia sinensis var. sinensis CSS0032845 PREDICTED: RING-H2 finger protein ATL46-like [Fragaria vesca subsp. vesca] Chr1 + View
Cicer arietinum L. Ca_04211_v3 Ca_LG2_v3 - View
Corylus avellana Haze_14652 Similar to ATL46: RING-H2 finger protein ATL46 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g02360 Uncharacterized protein chr7 + View
Citrus clementina Ciclev10015556m.g scaffold_2 + View
Cardamine hirsuta CARHR261850 Ring finger protein, putative Chr8 - View
Carya illinoinensis CiPaw.03G036200 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr03 + View
Carya illinoinensis CiPaw.04G023700 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr04 + View
Citrullus lanatus ClCG09G018810 Ring finger protein, putative CG_Chr09 + View
Capsella rubella Carub.0007s3538 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 scaffold_7 - View
Daucus carota DCAR_015036 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv33509 GWHABJS00000014 - View
Durio zibethinus Duzib147G0051 NW_019168470.1 + View
Durio zibethinus Duzib187G0392 NW_019167860.1 + View
Erigeron canadensis ECA238G2326 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.J02181 Chr10 + View
Erythranthe guttata Migut.K01366 scaffold_11 - View
Erythranthe guttata Migut.H00134 scaffold_8 + View
Erythranthe guttata Migut.E00151 scaffold_5 + View
Eutrema salsugineum Thhalv10028349m.g PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 scaffold_14 - View
Fragaria x ananassa FAN05G0519 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 Fvb6-3 - View
Fragaria vesca FvH4_6g50460 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Fvb6 + View
Gossypium hirsutum Gohir.D09G024900 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 D09 + View
Gossypium hirsutum Gohir.A09G025500 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 A09 + View
Gossypium hirsutum Gohir.A07G218900 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 A07 + View
Gossypium hirsutum Gohir.D07G225800 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 D07 + View
Gossypium raimondii Gorai.006G029000 Chr06 + View
Gossypium raimondii Gorai.001G260700 Chr01 + View
Lupinus albus Lalb_Chr21g0319351 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Lalb_Chr21 + View
Lotus japonicus Lj2g0007273 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 chr2 + View
Lonicera japonica Lju41C33T5 GWHAAZE00000094 + View
Lonicera japonica Lj7P589T34 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_4_181561 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_2_92520 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Lsat_1_v8_lg_2 - View
Malus domestica MD09G1036200 RING/U-box superfamily protein Chr09 - View
Nicotiana tabacum Nitab4.5_0001727g0020 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001727 - View
Punica granatum PGR142G2471 NC_045128.1 + View
Prunus persica Prupe.3G281500 Pp03 + View
Populus trichocarpa Potri.017G072300 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr17 - View
Quercus lobata QL02p076837 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0168281 RcHm_v2.0_Chr2 - View
Striga asiatica SGA_v2.0_scaffold135G34852 scaffold135 + View
Striga asiatica SGA_v2.0_scaffold30G12484 scaffold30 - View
Striga asiatica SGA_v2.0_scaffold205G41712 scaffold205 - View
Sechium edule Sed0021295 LG06 + View
Sechium edule Sed0001756 LG11 - View
Schrenkiella parvula Sp7g01700 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 ch7-1 - View
Solanum pennellii Sopen02g016790 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 + View
Solanum pennellii Sopen02g031720 hypothetical protein Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400038862 Ring finger protein ST4.03ch02 + View
Theobroma cacao Thecc.04G006500 RING/U-box superfamily protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104821067 RING-H2 finger protein ATL46-like NW_010966372.1 - View
Tarenaya hassleriana THA.LOC104822959 RING-H2 finger protein ATL47-like NW_010966822.1 + View
Tripterygium wilfordii TWI56G0373 NC_052242.1 + View