Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc02g089240.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QNZ5_ARTAN) SL4.0ch02 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G16820 LG-9 - View
Aethionema arabicum Aa31LG5G12830 LG-5 + View
Acer truncatum Atru.chr11.1587 chr11 + View
Actinidia chinensis Actinidia18080 Lachesis_group11 - View
Actinidia chinensis Actinidia17604 Lachesis_group21 - View
Actinidia chinensis Actinidia26269 Lachesis_group3 - View
Arabidopsis lyrata AL6G26630 scaffold_6 + View
Arabidopsis lyrata AL2G28150 scaffold_2 + View
Arabidopsis lyrata AL3G11570 scaffold_3 + View
Avicennia marina MSTRG.15435 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.2974 ScioBoG_102835_HRSCAF_103059 + View
Amaranthus hybridus Ah.10g038180 E3 ubiquitin-protein ligase At3g02290 (EC 2.3.2.27) (RING finger protein At3g02290) (RING-type E3 ubiquitin transferase At3g02290) AmaHy_arrow1_Scaffold_10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S2V195 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MU4MH9 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TZF9D3 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A3SJ0D PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT1G69085 E3 ubiquitin-protein ligase Chr1 + View
Arabidopsis thaliana AT5G38895 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15790.2). Chr5 + View
Brassica carinata BcaC04g18937 ChrC04 - View
Brassica carinata BcaC05g30342 ChrC05 + View
Brassica napus C06p37190 C06 - View
Brassica oleracea BolC5t35092H C5 - View
Beta vulgaris EL10Ac2g04441 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0008487 E3 ubiquitin-protein ligase [Morus notabilis] Chr2 - View
Cannabis sativa CANSAT64G2486 NC_044379.1 + View
Corylus avellana Haze_14381 Similar to At3g02290: E3 ubiquitin-protein ligase At3g02290 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g04490 E3 ubiquitin-protein ligase At3g02290 chr7 - View
Citrus clementina Ciclev10012668m.g scaffold_6 - View
Carpinus fangiana Cfa008855 Cfa03 + View
Carpinus fangiana Cfa007696 Cfa03 - View
Cardamine hirsuta CARHR263640 RING/U-box superfamily protein Chr8 - View
Cardamine hirsuta CARHR197540 RING/U-box superfamily protein Chr6 - View
Cardamine hirsuta CARHR076250 RING/U-box superfamily protein Chr3 + View
Carya illinoinensis CiPaw.04G052200 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr04 + View
Carya illinoinensis CiPaw.03G082900 PF12678 - RING-H2 zinc finger (zf-rbx1) Chr03 + View
Citrullus lanatus ClCG11G004970 RING/U-box superfamily protein CG_Chr11 - View
Cucumis melo MELO3C022050.2 E3 ubiquitin-protein ligase chr09 + View
Chenopodium quinoa AUR62009480 At3g02290: E3 ubiquitin-protein ligase At3g02290 C_Quinoa_Scaffold_3674 + View
Chenopodium quinoa AUR62023159 At3g02290: E3 ubiquitin-protein ligase At3g02290 C_Quinoa_Scaffold_1189 + View
Capsella rubella Carub.0003s0140 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_3 + View
Capsella rubella Carub.0002s1571 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_2 + View
Capsella rubella Carub.0006s1394 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_6 + View
Capsella rubella Carub.0007s3695 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_7 - View
Cucumis sativus L. CsaV3_5G038700 E3 ubiquitin-protein ligase At3g02290 chr5 - View
Daucus carota DCAR_011020 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv33863 GWHABJS00000014 - View
Durio zibethinus Duzib138G0871 NW_019167893.1 + View
Durio zibethinus Duzib133G0861 NW_019167938.1 - View
Erigeron canadensis ECA238G0850 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.I02063 Chr09 - View
Erythranthe guttata Migut.H00585 scaffold_8 + View
Eutrema salsugineum Thhalv10027926m.g PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_14 - View
Fragaria x ananassa FAN14G0277 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria x ananassa FAN05G2053 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN02G4287 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria vesca FvH4_6g46360 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D07G186500 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.D13G084450 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D13 - View
Glycine max Glyma.13G052000 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.18G274000 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm18 - View
Glycine max Glyma.08G251300 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm08 - View
Glycine max Glyma.19G034700 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm19 - View
Gossypium raimondii Gorai.001G207100 Chr01 + View
Lupinus albus Lalb_Chr06g0174871 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr06 - View
Lupinus albus Lalb_Chr04g0258371 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr04 + View
Lupinus albus Lalb_Chr02g0158791 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr02 - View
Lupinus albus Lalb_Chr21g0318251 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr21 - View
Lupinus albus Lalb_Chr10g0092721 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr10 + View
Lupinus albus Lalb_Chr17g0336791 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr17 - View
Lotus japonicus Lj2g0021976 PF12678 - RING-H2 zinc finger (zf-rbx1) chr2 + View
Lonicera japonica Lju361A6G24 GWHAAZE00000081 - View
Lonicera japonica Lj4A123G18 GWHAAZE00000004 - View
Malus domestica MD17G1065800 RING/U-box superfamily protein Chr17 - View
Malus domestica MD09G1074400 RING/U-box superfamily protein Chr09 - View
Manihot esculenta Manes.01G103500 Chromosome01 - View
Manihot esculenta Manes.02G059500 Chromosome02 - View
Nicotiana tabacum Nitab4.5_0002249g0020 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0002249 - View
Olea europaea Oeu007081.1 scaffold126 - View
Olea europaea Oeu062181.2 chr10 - View
Olea europaea Oeu033410.1 chr2 + View
Punica granatum PGR004G0479 NC_045131.1 + View
Prunus persica Prupe.3G248900 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp03 + View
Populus trichocarpa Potri.017G100100 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr17 - View
Phaseolus vulgaris Phvul.008G026500 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Quercus lobata QL02p065865 CM012294 + View
Quercus lobata QL03p073379 3 + View
Rhododendron simsii Rhsim10G0056500 chr10 - View
Rhododendron simsii Rhsim08G0077300 chr08 - View
Rhododendron simsii Rhsim09G0124700 chr09 + View
Striga asiatica SGA_v2.0_scaffold52G19113 scaffold52 + View
Striga asiatica SGA_v2.0_scaffold4G02356 scaffold4 + View
Salix brachista Sabra17G0086300 GWHAAZH00000017 - View
Salix brachista Sabra04G0071300 GWHAAZH00000004 - View
Simmondsia chinensis Sc11g0008810 GWHAASQ00000011 - View
Sechium edule Sed0020163 LG03 - View
Sechium edule Sed0014999 LG11 + View
Schrenkiella parvula Sp3g01350 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch3-1 + View
Schrenkiella parvula Sp7g03010 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch7-1 - View
Schrenkiella parvula Sp6g28330 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch6-6 - View
Solanum pennellii Sopen02g015940 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch02 + View
Solanum pennellii Sopen02g034030 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch02 - View
Selenicereus undatus Hund16234 Scaffold_33677 - View
Trochodendron aralioides TAR374G0179 group12 - View
Trochodendron aralioides TAR629G0419 group0 + View
Trochodendron aralioides TAR371G1116 group13 - View
Theobroma cacao Thecc.02G325700 RING/U-box superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104823880 E3 ubiquitin-protein ligase At3g02290 NW_010966881.1 + View
Trifolium pratense TPR.G15961 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI32G0202 NC_052254.1 - View
Tripterygium wilfordii TWI34G1806 NC_052235.1 + View
Tripterygium wilfordii TWI60G0607 NC_052246.1 - View
Utricularia gibba unitig_748.g8416 unitig_748 + View
Utricularia gibba unitig_52.g17632 unitig_52 + View
Vaccinium macrocarpon vmacro18127 Similar to At3g02290: E3 ubiquitin-protein ligase At3g02290 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05614 Similar to At3g02290: E3 ubiquitin-protein ligase At3g02290 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0893 CM024070.1 + View
Vitis vinifera GSVIVG01036545001 chr14 + View