Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc06g009710.4 R2R3MYB transcription factor 111 SL4.0ch06 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G16430 LG-10 + View
Aethionema arabicum Aa31LG11G7860 LG-11 - View
Acer truncatum Atru.chr5.1043 chr5 + View
Actinidia chinensis Actinidia25838 Lachesis_group15 - View
Actinidia chinensis Actinidia27607 Lachesis_group24 - View
Actinidia chinensis Actinidia21010 Lachesis_group9 - View
Arabidopsis lyrata AL4G47020 scaffold_4 + View
Arabidopsis lyrata AL5G45360 scaffold_5 + View
Aquilegia oxysepala Aqoxy2G02799 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H8DJRL PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT3G62610 myb domain protein 11 Member of the R2R3 factor gene family. myb domain protein 11 (MYB11)%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%2C Myb transcription factor (InterPro:IPR015495)%3B BEST Arabidopsis thaliana protein match is: myb domain protein 12 (TAIR:AT2G47460.1)%3B Has 8738 Blast hits to 8112 proteins in 470 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 742%3B Fungi - 445%3B Plants - 5931%3B Viruses - 3%3B Other Eukaryotes - 1617 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0706G288 AmTr_v1.0_scaffold00057 - View
Brassica carinata BcaB02g08770 ChrB02 - View
Brassica carinata BcaC02g06976 ChrC02 + View
Brassica napus C04p00420 C04 - View
Brassica napus A05p00470 A05 - View
Brassica oleracea BolC4t28762H C4 + View
Brassica rapa BraA05t19045Z A05 - View
Beta vulgaris EL10As5g23501 PTHR10641//PTHR10641:SF595 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR Scaffold_0005 - View
Camellia sinensis var. sinensis CSS0021675 MYB-like DNA-binding domain protein [Theobroma cacao] Chr11 + View
Camellia sinensis var. sinensis CSS0029945 putative MYB transcription factor [Rosa hybrid cultivar] Chr9 + View
Capsicum annuum CAN.G69.2 PGAv.1.6.scaffold69 + View
Cannabis sativa CANSAT25G2207 NC_044370.1 + View
Cicer arietinum L. Ca_10297_v3 Ca_LG4_v3 + View
Corylus avellana Haze_05015 Similar to MYB12: Transcription factor MYB12 (Arabidopsis thaliana OX%3D3702) 2 - View
Coffea canephora Cc01_g21250 Putative MYB1 protein chr1 - View
Citrus clementina Ciclev10023756m.g scaffold_3 - View
Citrus clementina Ciclev10005376m.g scaffold_9 + View
Ceratophyllum demersum CDE05G2531 3 + View
Ceratophyllum demersum CDE11G0061 9 + View
Carpinus fangiana Cfa005829 Cfa02 + View
Cardamine hirsuta CARHR172880 Myb domain protein 11 Chr5 + View
Cardamine hirsuta CARHR142850 myb domain protein 12 Chr4 + View
Carya illinoinensis CiPaw.08G091400 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Chr08 - View
Carya illinoinensis CiPaw.07G115500 PTHR10641//PTHR10641:SF595 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR Chr07 - View
Carya illinoinensis CiPaw.01G141900 PTHR10641//PTHR10641:SF595 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR Chr01 + View
Citrullus lanatus ClCG10G011260 myb domain protein 12 LENGTH=371 CG_Chr10 - View
Cucumis melo MELO3C017925.2 Myb transcription factor chr07 + View
Carica papaya Cpa.g.sc9.95 supercontig_9 + View
Carica papaya Cpa.g.sc18.11 supercontig_18 - View
Capsella rubella Carub.0005s2927 PTHR10641//PTHR10641:SF203 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 11-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_4G001130 Myb transcription factor chr4 - View
Daucus carota DCAR_002875 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_012365 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv33102 GWHABJS00000010 - View
Davidia involucrata Dinv10076 GWHABJS00000007 + View
Davidia involucrata Dinv44316 GWHABJS00000014 - View
Durio zibethinus Duzib151G0727 NW_019167904.1 - View
Durio zibethinus Duzib211G0677 NW_019168049.1 + View
Durio zibethinus Duzib133G0010 NW_019167938.1 + View
Erigeron canadensis ECA247G0041 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.H01058 Chr08 + View
Eutrema salsugineum Thhalv10006080m.g PTHR10641:SF203 - MYB DOMAIN PROTEIN 11-RELATED scaffold_19 - View
Fragaria x ananassa FAN18G1939 PTHR10641:SF203 - MYB DOMAIN PROTEIN 11-RELATED Fvb5-1 + View
Fragaria x ananassa FAN13G2841 PTHR10641:SF203 - MYB DOMAIN PROTEIN 11-RELATED Fvb5-2 + View
Fragaria x ananassa FAN07G2174 PTHR10641//PTHR10641:SF203 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 11-RELATED Fvb4-4 + View
Fragaria x ananassa FAN08G1345 PTHR10641//PTHR10641:SF203 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 11-RELATED Fvb5-3 - View
Fragaria x ananassa FAN04G2155 PTHR10641//PTHR10641:SF203 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 11-RELATED Fvb5-4 + View
Fragaria vesca FvH4_5g39550 PTHR10641//PTHR10641:SF203 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 11-RELATED Fvb5 + View
Fragaria vesca FvH4_4g19310 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Fvb4 - View
Gossypium hirsutum Gohir.D12G129800 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR D12 + View
Gossypium hirsutum Gohir.D07G131900 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR D07 + View
Gossypium hirsutum Gohir.A07G127600 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR A07 + View
Gossypium hirsutum Gohir.A11G110700 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR A11 + View
Gossypium hirsutum Gohir.D11G115800 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR D11 + View
Glycine max Glyma.03G218200 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Gm03 - View
Glycine max Glyma.10G014600 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Gm10 + View
Glycine max Glyma.02G013900 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Gm02 + View
Glycine max Glyma.15G144000 PTHR10641//PTHR10641:SF203 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB DOMAIN PROTEIN 11-RELATED Gm15 + View
Glycine max Glyma.19G214900 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Gm19 - View
Gossypium raimondii Gorai.008G141000 Chr08 + View
Gossypium raimondii Gorai.007G124000 Chr07 + View
Gossypium raimondii Gorai.001G143200 Chr01 + View
Helianthus annuus HanXRQChr10g0285411 Putative homeodomain-like HanXRQChr10 + View
Helianthus annuus HanXRQChr01g0000831 Putative homeodomain-like HanXRQChr01 + View
Hydrangea macrophylla Hma1.2p1_0212F.1_g090060 Hma1.2p1_0212F.1 + View
Lupinus albus Lalb_Chr02g0146701 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Lalb_Chr02 - View
Lupinus albus Lalb_Chr18g0046801 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Lalb_Chr18 + View
Lupinus albus Lalb_Chr15g0078341 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Lalb_Chr15 + View
Lupinus albus Lalb_Chr15g0087601 PTHR10641//PTHR10641:SF669 - MYB-LIKE DNA-BINDING PROTEIN MYB // SUBFAMILY NOT NAMED Lalb_Chr15 - View
Lotus japonicus Lj5g0016381 PTHR10641//PTHR10641:SF595 - MYB-LIKE DNA-BINDING PROTEIN MYB // MYB TRANSCRIPTION FACTOR chr5 + View
Lotus japonicus Lj1g0007460 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR chr1 - View
Lonicera japonica Lj3A827G67 GWHAAZE00000003 - View
Lonicera japonica Lj2A1203G21 GWHAAZE00000002 - View
Magnolia biondii MBI19_g22893_MAGBIO AED:0.01 Chr19 + View
Malus domestica MD13G1158000 myb domain protein 111 Chr13 + View
Malus domestica MD16G1158800 myb domain protein 111 Chr16 + View
Malus domestica MD11G1316800 myb domain protein 12 Chr11 + View
Malus domestica MD03G1297100 myb domain protein 12 Chr03 + View
Manihot esculenta Manes.15G006600 Chromosome15 + View
Manihot esculenta Manes.01G226200 Chromosome01 - View
Medicago truncatula Medtr1g087540 myb transcription factor, putative chr1 + View
Medicago truncatula Medtr7g109320 myb transcription factor chr7 - View
Nelumbo nucifera Nn4g25647 chr4 + View
Nicotiana tabacum Nitab4.5_0000116g0020 Myb domain, Homeodomain-like, SANT/Myb domain Nitab4.5_0000116 + View
Nicotiana tabacum Nitab4.5_0000906g0090 SANT/Myb domain, Myb domain, Homeodomain-like Nitab4.5_0000906 + View
Olea europaea Oeu008456.1 chr1 - View
Oryza sativa ssp. japonica Os03g0303500 R2R3-MYB transcription factor R2R3-MYB transcription factor, Anthocyanin biosynthesis in rice leaves, Activation of upstream anthocyanin biosynthetic genes chr03 - View
Petunia axillaris Peaxi162Scf00001g00231 myb domain protein 111 Peaxi162Scf00001 + View
Prunus persica Prupe.8G270000 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Pp08 - View
Prunus persica Prupe.1G125300 K09422 - myb proto-oncogene protein, plant (MYBP) Pp01 + View
Pisum sativum Psat6g163240 Myb-like DNA-binding domain chr6LG2 + View
Pisum sativum Psat3g020600 Myb-like DNA-binding domain chr3LG5 + View
Papaver somniferum PSO761G0087 NW_020622381.1 - View
Papaver somniferum PSO210G0084 NC_039359.1 - View
Papaver somniferum PSO357G0545 NW_020622934.1 + View
Populus trichocarpa Potri.002G198100 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Chr02 + View
Populus trichocarpa Potri.014G122700 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Chr14 + View
Phaseolus vulgaris Phvul.007G215800 PTHR10641:SF595 - MYB TRANSCRIPTION FACTOR Chr07 + View
Quercus lobata QL12p029016 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0241861 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim01G0289600 chr01 - View
Rhododendron simsii Rhsim13G0006200 chr13 + View
Salvia bowleyana SalBow2G1171 GWHASIU00000007 - View
Salix brachista Sabra14G0091100 GWHAAZH00000014 + View
Salix brachista Sabra02G0159500 GWHAAZH00000002 - View
Salix brachista Sabra10G0109000 GWHAAZH00000010 - View
Sechium edule Sed0007788 LG06 + View
Schrenkiella parvula Sp5g00890 PTHR10641:SF203 - MYB DOMAIN PROTEIN 11-RELATED ch5-1 - View
Schrenkiella parvula Sp4g29400 K09422 - myb proto-oncogene protein, plant (MYBP) ch4-6 + View
Solanum pennellii Sopen01g031400 MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3hydroxylase (F3H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots. | myb domain protein 12 (MYB12) | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related , Myb transcription factor | BEST Arabidopsis thaliana protein match is: myb domain protein 11 Spenn-ch01 + View
Solanum pennellii Sopen06g004360 Myb-related protein P - Zea mays (Maize), MYB12 belongs to subgroup 7 of the R2R3-MYB family. It strongly activates the promoters of chalcone synthase (CHS), flavanone 3-hydroxylase (F3H), flavonol synthase (FLS) and - to a lesser extent - chalcone flavanone isomerase (CHI), but cannot activate the promoters of flavonoid-3hydroxylase (F3H) and dihydroflavonol 4-reductase (DF). The activation requires a functional MYB recognition element (MRE). Results from the myb12-1f allele indicate that an activation domain might be present in the C-terminus. Overexpression or knock-out plants do not show any obvious phenotype under greenhouse conditions. Young myb12-ko seedlings contain reduced amounts of flavonoids (quercetin and kaempferol), while seedlings as well as leaves of MYB12-OX plants displayed an increased flavonoid content. They did not show any significant difference in anthocyanin content. Expression of CHS and FLS shows a clear correlation to MYB12 expression levels. CHI and F3H show increased transcript levels in the MYB12-OX lines, but no differences in the knock-out. Even in the absence of functional MYB12, flavonol biosynthesis is not completely absent, suggesting functional redundancy. The redundant factors are MYB11 and MYB111 although MYB12 is primarily required for flavonol biosynthesis in roots. | myb domain protein 12 (MYB12) | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related , Myb transcription factor | BEST Arabidopsis thaliana protein match is: myb domain protein 11 Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400009033 Myb 12 transcription factor ST4.03ch01 - View
Theobroma cacao Thecc.04G295600 Myb domain protein 111 Chromosome_4 - View
Theobroma cacao Thecc.01G310800 MYB-like DNA-binding domain protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104822289 transcription factor MYB86-like NW_010966665.1 + View
Tarenaya hassleriana THA.LOC104817466 transcription factor MYB12-like NW_010965946.1 + View
Trifolium pratense TPR.G19770 Tp57577_TGAC_v2_scaf_326 + View
Trifolium pratense TPR.G4203 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI18G1223 NC_052241.1 + View
Tripterygium wilfordii TWI36G1207 NC_052237.1 - View
Tripterygium wilfordii TWI73G1100 NC_052232.1 + View
Vaccinium macrocarpon vmacro15122 Similar to MYB12: Transcription factor MYB12 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G1938 CM024071.1 - View
Vigna mungo VMungo1383G1420 CM024070.1 - View
Vitis vinifera GSVIVG01028091001 chr7 - View
Vitis vinifera GSVIVG01035041001 chr5 + View
Zea mays Zm00001eb396390 Zm00001e038356 MYB transcription factor Transcription factor MYB12 9 + View
Zea mays Zm00001eb014260 Zm00001e101360 Myb-like transcription factor pericarp color2 1 - View