Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sed0004369 LG05 + View
Sed0001010 LG10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G24370 LG-1 - View
Aethionema arabicum Aa31LG5G5800 LG-5 + View
Acer truncatum Atru.chr6.2816 chr6 + View
Actinidia chinensis Actinidia10975 Lachesis_group19 - View
Arabidopsis lyrata AL4G41120 scaffold_4 - View
Arabidopsis lyrata AL4G26300 scaffold_4 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VCKK92 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TH8K2R PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YNE1J7 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED arahy.Tifrunner.gnm1.Arahy.20 + View
Arabidopsis thaliana AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 39 (TBL39)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: vacuole%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT2G31110.2)%3B Has 1331 Blast hits to 1312 proteins in 27 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 1329%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0602G147 AmTr_v1.0_scaffold00021 - View
Brassica carinata BcaC09g48453 ChrC09 + View
Brassica napus C04p03730 C04 - View
Brassica napus A05p03110 A05 - View
Brassica oleracea BolC4t22007H C4 - View
Brassica rapa BraA01t03945Z A01 - View
Brassica rapa BraA04t17910Z A04 - View
Brassica rapa BraA05t19301Z A05 - View
Camellia sinensis var. sinensis CSS0009104 PREDICTED: protein trichome birefringence-like 39 [Vitis vinifera] Chr7 - View
Capsicum annuum CAN.G782.6 PGAv.1.6.scaffold782 + View
Cannabis sativa CANSAT35G0083 NC_044378.1 + View
Cannabis sativa CANSAT35G0229 NC_044378.1 - View
Corylus avellana Haze_13346 Similar to TBL39: Protein trichome birefringence-like 39 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_06258 Similar to TBL38: Protein trichome birefringence-like 38 (Arabidopsis thaliana OX%3D3702) 2 + View
Citrus clementina Ciclev10015687m.g scaffold_2 - View
Cardamine hirsuta CARHR137710 TRICHOME BIREFRINGENCE-LIKE 39 Chr4 - View
Carya illinoinensis CiPaw.10G057800 PTHR32285//PTHR32285:SF15 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Chr10 - View
Carya illinoinensis CiPaw.09G068400 PTHR32285//PTHR32285:SF15 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Chr09 - View
Citrullus lanatus ClCG02G017960 TRICHOME BIREFRINGENCE-LIKE 39 LENGTH=367 CG_Chr02 + View
Citrullus lanatus ClCG01G023660 TRICHOME BIREFRINGENCE-LIKE 38 LENGTH=380 CG_Chr01 - View
Citrullus lanatus ClCG09G011390 TRICHOME BIREFRINGENCE-LIKE 4 LENGTH=457 CG_Chr09 + View
Cucumis melo MELO3C002641.2 Protein trichome birefringence chr12 + View
Cucumis melo MELO3C031148.2 Protein trichome birefringence chr05 - View
Cucumis melo MELO3C019762.2 Protein trichome birefringence chr11 - View
Cucumis melo MELO3C007219.2 Protein trichome birefringence chr08 + View
Capsella rubella Carub.0004s2502 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED scaffold_4 - View
Cucumis sativus L. CsaV3_6G037570 protein trichome birefringence-like 42 chr6 - View
Cucumis sativus L. CsaV3_6G050810 Protein trichome birefringence-like chr6 - View
Daucus carota DCAR_021285 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv18347 GWHABJS00000013 + View
Davidia involucrata Dinv03913 GWHABJS00000001 - View
Davidia involucrata Dinv15460 GWHABJS00000013 - View
Durio zibethinus Duzib160G0350 NW_019168015.1 + View
Durio zibethinus Duzib192G0445 NW_019168037.1 - View
Durio zibethinus Duzib235G1480 NW_019167982.1 + View
Erigeron canadensis ECA236G2147 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.A01898 Chr01 + View
Erythranthe guttata Migut.H01451 scaffold_8 + View
Erythranthe guttata Migut.M00252 scaffold_13 - View
Erythranthe guttata Migut.M00744 scaffold_13 - View
Eutrema salsugineum Thhalv10016832m.g PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED scaffold_10 - View
Eutrema salsugineum Thhalv10016834m.g PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED scaffold_10 - View
Fragaria x ananassa FAN16G3264 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Fvb3-3 + View
Fragaria x ananassa FAN09G3090 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Fvb6-2 + View
Fragaria x ananassa FAN05G2584 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Fvb6-3 - View
Fragaria x ananassa FAN14G5521 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Fvb6-1 + View
Gossypium hirsutum Gohir.D05G344400 PTHR32285//PTHR32285:SF66 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 31 D05 - View
Gossypium hirsutum Gohir.A09G074200 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED A09 - View
Glycine max Glyma.12G209600 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Gm12 - View
Glycine max Glyma.12G122300 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Gm12 - View
Glycine max Glyma.13G230800 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Gm13 + View
Glycine max Glyma.13G291700 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Gm13 + View
Gossypium raimondii Gorai.009G372400 Chr09 - View
Helianthus annuus HanXRQChr12g0373481 Plant Protein of unknown function (DUF828) HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0178F.1_g079000 Hma1.2p1_0178F.1 + View
Lupinus albus Lalb_Chr03g0029871 PTHR32285//PTHR32285:SF71 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Lalb_Chr03 - View
Lotus japonicus Lj6g0000934 PTHR32285//PTHR32285:SF15 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED chr6 + View
Lonicera japonica Lj2C297T14 GWHAAZE00000002 - View
Lonicera japonica Lj8P103T61 GWHAAZE00000008 + View
Lonicera japonica Lj1A1194T83 GWHAAZE00000001 + View
Lonicera japonica Lj1A686G49 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_23140 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Lsat_1_v8_lg_7 - View
Malus domestica MD09G1239800 Plant protein of unknown function (DUF828) Chr09 - View
Manihot esculenta Manes.17G054100 Chromosome17 - View
Manihot esculenta Manes.16G037300 Chromosome16 - View
Manihot esculenta Manes.12G091400 Chromosome12 - View
Medicago truncatula Medtr2g091175 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr2 - View
Medicago truncatula Medtr4g079700 Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein chr4 - View
Nicotiana tabacum Nitab4.5_0000035g0030 PC-Esterase Nitab4.5_0000035 + View
Petunia axillaris Peaxi162Scf00469g00013 TRICHOME BIREFRINGENCE-LIKE 39 Peaxi162Scf00469 - View
Punica granatum PGR042G0709 NC_045130.1 - View
Punica granatum PGR031G2233 NC_045127.1 - View
Punica granatum PGR042G1745 NC_045130.1 - View
Prunus persica Prupe.4G059400 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Pp04 - View
Prunus persica Prupe.3G123000 PF14416 - PMR5 N terminal Domain (PMR5N) Pp03 - View
Papaver somniferum PSO782G3031 NC_039365.1 + View
Populus trichocarpa Potri.011G064700 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Chr11 - View
Populus trichocarpa Potri.019G090000 PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Chr19 - View
Populus trichocarpa Potri.004G055000 PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Chr04 - View
Phaseolus vulgaris Phvul.005G096200 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED Chr05 + View
Phaseolus vulgaris Phvul.006G177100 Chr06 + View
Phaseolus vulgaris Phvul.011G159100 PTHR32285:SF66 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 31 Chr11 + View
Quercus lobata QL08p041353 8 - View
Quercus lobata QL08p026879 8 - View
Rhododendron simsii Rhsim06G0133200 chr06 - View
Rhododendron simsii Rhsim04G0073800 chr04 - View
Salvia bowleyana SalBow7G0981 GWHASIU00000005 - View
Salix brachista Sabra19G0103800 GWHAAZH00000019 - View
Salix brachista Sabra11G0046500 GWHAAZH00000011 - View
Salix brachista Sabra04G0035800 GWHAAZH00000004 - View
Simmondsia chinensis Sc16g0007460 GWHAASQ00000016 + View
Simmondsia chinensis Sc12g0003450 GWHAASQ00000012 - View
Solanum lycopersicum Solyc12g014200.3 Protein trichome birefringence-like 31 (AHRD V3.3 *** A0A2G2X2L8_CAPBA) SL4.0ch12 + View
Solanum lycopersicum Solyc07g053330.2 Protein trichome birefringence (AHRD V3.3 *** A0A1J3I8M9_NOCCA) SL4.0ch07 - View
Schrenkiella parvula Sp4g24700 PTHR32285:SF71 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 39-RELATED ch4-6 - View
Solanum pennellii Sopen12g005990 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TBL31 | LOCATED IN: endomembrane system | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) Spenn-ch12 + View
Solanum pennellii Sopen07g027290 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 3 (TBL3) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400020431 Conserved gene of unknown function ST4.03ch07 - View
Selenicereus undatus Hund00915 Scaffold_33678 - View
Trochodendron aralioides TAR624G1114 group9 + View
Trochodendron aralioides TAR629G0443 group0 - View
Theobroma cacao Thecc.06G173100 Trichome birefringence-like 37 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104826221 protein trichome birefringence-like 40 NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104802874 protein trichome birefringence-like 39 NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104822967 protein trichome birefringence-like 39 isoform X1 NW_010960187.1 - View
Trifolium pratense TPR.G11512 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI23G0562 NC_052239.1 - View
Vaccinium macrocarpon vmacro09224 Similar to TBL39: Protein trichome birefringence-like 39 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro12366 Similar to TBL39: Protein trichome birefringence-like 39 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G1471 CM024079.1 - View
Vitis vinifera GSVIVG01020682001 chr12 - View
Vitis vinifera GSVIVG01021192001 chr10 - View