Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G18100 LG-1 - View
Actinidia chinensis Actinidia20052 Lachesis_group11 - View
Actinidia chinensis Actinidia06595 Lachesis_group16 + View
Arabidopsis lyrata AL8G41000 scaffold_8 + View
Amaranthus hybridus Ah.02g117510 AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy6G00248 CHR06 + View
Arabidopsis thaliana AT5G63780 RING/FYVE/PHD zinc finger superfamily protein Encodes SHA1 (shoot apical meristem arrest)%2C a putative E3 ligase (a RING finger protein) required for post-embryonic SAM maintenance. The mutant sha1-1 shows a primary SAM-deficient phenotype at the adult stage. shoot apical meristem arrest 1 (SHA1)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: maintenance of shoot apical meristem identity%2C meristem development%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G08750.2)%3B Has 328 Blast hits to 324 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 327%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0584G091 AmTr_v1.0_scaffold00017 - View
Brassica carinata BcaB07g29704 ChrB07 + View
Brassica carinata BcaC03g18224 ChrC03 + View
Brassica napus C02p62930 C02 + View
Brassica napus A06p30370 A06 + View
Brassica oleracea BolC2t12367H C2 + View
Brassica rapa BraA02t09221Z A02 + View
Brassica rapa BraA06t25985Z A06 + View
Brassica rapa BraA10t44852Z A10 - View
Beta vulgaris EL10Ac4g09673 PTHR23012:SF66 - RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0012446 PREDICTED: uncharacterized protein LOC100243998 [Vitis vinifera] Chr1 - View
Cicer arietinum L. Ca_17614_v3 Ca_LG6_v3 + View
Corylus avellana Haze_25352 Protein of unknown function 8 + View
Coffea canephora Cc07_g19420 RING/FYVE/PHD zinc finger superfamily protein chr7 - View
Citrus clementina Ciclev10001627m.g scaffold_5 + View
Cardamine hirsuta CARHR277690 RING/FYVE/PHD zinc finger superfamily protein Chr8 + View
Carya illinoinensis CiPaw.04G077800 PTHR23012:SF66 - RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Chr04 + View
Carya illinoinensis CiPaw.03G116400 PTHR23012//PTHR23012:SF66 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Chr03 + View
Carica papaya Cpa.g.sc37.31 supercontig_37 - View
Chenopodium quinoa AUR62000544 Protein of unknown function C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62006895 Protein of unknown function C_Quinoa_Scaffold_3429 - View
Capsella rubella Carub.0008s2455 PTHR23012//PTHR23012:SF66 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN scaffold_8 + View
Davidia involucrata Dinv30333 GWHABJS00000014 + View
Durio zibethinus Duzib187G1464 NW_019167860.1 + View
Durio zibethinus Duzib147G0616 NW_019168470.1 + View
Eucalyptus grandis Eucgr.H05084 Chr08 + View
Erythranthe guttata Migut.H00831 scaffold_8 - View
Eutrema salsugineum Thhalv10004833m.g PTHR23012:SF66 - RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN scaffold_6 - View
Fragaria x ananassa FAN28G0848 PTHR23012:SF66 - RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Fvb1-1 + View
Fragaria x ananassa FAN26G1144 PTHR23012:SF66 - RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Fvb1-2 - View
Glycine max Glyma.08G002800 PTHR23012//PTHR23012:SF66 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Gm08 - View
Lupinus albus Lalb_Chr12g0202971 PTHR23012//PTHR23012:SF66 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Lalb_Chr12 + View
Lotus japonicus Lj4g0020231 PTHR23012:SF66 - RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN chr4 + View
Malus domestica MD15G1137500 RING/FYVE/PHD zinc finger superfamily protein Chr15 + View
Medicago truncatula Medtr8g094610 RING/FYVE/PHD zinc finger protein chr8 - View
Olea europaea Oeu050099.1 chr14 + View
Pisum sativum Psat7g043760 RING-variant domain chr7LG7 + View
Papaver somniferum PSO528G0111 NW_020653081.1 + View
Populus trichocarpa Potri.007G098900 PTHR23012//PTHR23012:SF66 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Chr07 + View
Populus trichocarpa Potri.005G070100 PTHR23012//PTHR23012:SF66 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN Chr05 - View
Phaseolus vulgaris Phvul.002G275300 Chr02 - View
Quercus lobata QL10p040426 10 + View
Rhododendron simsii Rhsim10G0128700 chr10 - View
Salix brachista Sabra05G0057000 GWHAAZH00000005 - View
Schrenkiella parvula Sp2g26850 PTHR23012//PTHR23012:SF66 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN ch2-4 + View
Selenicereus undatus Hund07218 Scaffold_33676 + View
Selenicereus undatus Hund21795 Scaffold_33680 + View
Trochodendron aralioides TAR625G0825 group4 - View
Trochodendron aralioides TAR381G1701 group11 - View
Theobroma cacao Thecc.01G141100 RING/FYVE/PHD zinc finger superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104800223 uncharacterized protein LOC104800223 NW_010960188.1 - View
Trifolium pratense TPR.G37372 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI75G1048 NC_052253.1 - View
Tripterygium wilfordii TWI79G1634 NC_052238.1 - View
Vaccinium macrocarpon vmacro12767 Protein of unknown function chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G2363 CM024069.1 - View
Vitis vinifera GSVIVG01022361001 chr7 - View