Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc10g0000590 GWHAASQ00000010 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G13790 LG-11 - View
Acer truncatum Atru.chr8.647 chr8 + View
Actinidia chinensis Actinidia17604 Lachesis_group21 - View
Actinidia chinensis Actinidia26269 Lachesis_group3 - View
Actinidia chinensis Actinidia18080 Lachesis_group11 - View
Arabidopsis lyrata AL6G26630 scaffold_6 + View
Avicennia marina MSTRG.2974 ScioBoG_102835_HRSCAF_103059 + View
Avicennia marina MSTRG.15435 ScioBoG_19538_HRSCAF_19626 + View
Amaranthus hybridus Ah.10g038180 E3 ubiquitin-protein ligase At3g02290 (EC 2.3.2.27) (RING finger protein At3g02290) (RING-type E3 ubiquitin transferase At3g02290) AmaHy_arrow1_Scaffold_10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MU4MH9 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TZF9D3 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A3SJ0D PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S2V195 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT5G15790 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02290.1)%3B Has 5281 Blast hits to 5274 proteins in 238 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1803%3B Fungi - 302%3B Plants - 2328%3B Viruses - 9%3B Other Eukaryotes - 839 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02290.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB01g05027 ChrB01 - View
Brassica napus C09p61310 C09 - View
Brassica napus A10p23240 A10 - View
Brassica napus A03p07350 A03 + View
Brassica rapa BraA03t10059Z A03 + View
Brassica rapa BraA10t44392Z A10 - View
Beta vulgaris EL10Ac2g04441 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0008487 E3 ubiquitin-protein ligase [Morus notabilis] Chr2 - View
Cannabis sativa CANSAT64G2486 NC_044379.1 + View
Corylus avellana Haze_14381 Similar to At3g02290: E3 ubiquitin-protein ligase At3g02290 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g04490 E3 ubiquitin-protein ligase At3g02290 chr7 - View
Citrus clementina Ciclev10012668m.g scaffold_6 - View
Ceratophyllum demersum CDE04G2268 2 - View
Carpinus fangiana Cfa007696 Cfa03 - View
Cardamine hirsuta CARHR197540 RING/U-box superfamily protein Chr6 - View
Carya illinoinensis CiPaw.04G052200 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr04 + View
Carya illinoinensis CiPaw.03G082900 PF12678 - RING-H2 zinc finger (zf-rbx1) Chr03 + View
Citrullus lanatus ClCG11G004970 RING/U-box superfamily protein CG_Chr11 - View
Cucumis melo MELO3C022050.2 E3 ubiquitin-protein ligase chr09 + View
Chenopodium quinoa AUR62009480 At3g02290: E3 ubiquitin-protein ligase At3g02290 C_Quinoa_Scaffold_3674 + View
Chenopodium quinoa AUR62023159 At3g02290: E3 ubiquitin-protein ligase At3g02290 C_Quinoa_Scaffold_1189 + View
Capsella rubella Carub.0006s1394 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_6 + View
Daucus carota DCAR_011020 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_025454 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv34038 GWHABJS00000008 + View
Davidia involucrata Dinv33863 GWHABJS00000014 - View
Durio zibethinus Duzib138G0871 NW_019167893.1 + View
Durio zibethinus Duzib133G0861 NW_019167938.1 - View
Durio zibethinus Duzib251G0506 NW_019167971.1 + View
Erigeron canadensis ECA238G0850 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.I02063 Chr09 - View
Erythranthe guttata Migut.H00585 scaffold_8 + View
Eutrema salsugineum Thhalv10014574m.g PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_2 + View
Fragaria x ananassa FAN09G4137 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria x ananassa FAN02G4287 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria x ananassa FAN14G0277 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-1 - View
Fragaria x ananassa FAN05G2053 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria vesca FvH4_6g46360 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D07G084300 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.A07G079000 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED A07 + View
Gossypium hirsutum Gohir.D13G084450 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D13 - View
Gossypium hirsutum Gohir.A07G179700 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED A07 - View
Gossypium hirsutum Gohir.D07G186500 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D07 + View
Glycine max Glyma.18G274000 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm18 - View
Glycine max Glyma.13G052000 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.08G251300 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm08 - View
Glycine max Glyma.19G034700 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm19 - View
Gossypium raimondii Gorai.001G207100 Chr01 + View
Gossypium raimondii Gorai.013G096200 Chr13 - View
Gossypium raimondii Gorai.001G089900 Chr01 + View
Lupinus albus Lalb_Chr10g0092721 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr10 + View
Lupinus albus Lalb_Chr02g0158791 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr02 - View
Lotus japonicus Lj2g0021976 PF12678 - RING-H2 zinc finger (zf-rbx1) chr2 + View
Lotus japonicus Lj1g0008297 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED chr1 + View
Lonicera japonica Lj4A123G18 GWHAAZE00000004 - View
Magnolia biondii MBI16_g34537_MAGBIO AED:0.37 Chr16 + View
Magnolia biondii MBI19_g04939_MAGBIO AED:0.19 Chr19 + View
Malus domestica MD17G1065800 RING/U-box superfamily protein Chr17 - View
Malus domestica MD09G1074400 RING/U-box superfamily protein Chr09 - View
Manihot esculenta Manes.01G103500 Chromosome01 - View
Manihot esculenta Manes.02G059500 Chromosome02 - View
Nelumbo nucifera Nn3g17521 chr3 + View
Nelumbo nucifera Nn4g23521 chr4 + View
Olea europaea Oeu062181.2 chr10 - View
Petunia axillaris Peaxi162Scf00020g02340 RING/U-box superfamily protein Peaxi162Scf00020 + View
Punica granatum PGR004G0479 NC_045131.1 + View
Prunus persica Prupe.3G248900 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp03 + View
Pisum sativum Psat1g065160 RING-H2 zinc finger domain chr1LG6 + View
Papaver somniferum PSO017G1295 NC_039362.1 - View
Papaver somniferum PSO478G2892 NC_039361.1 + View
Populus trichocarpa Potri.004G114800 PF12678 - RING-H2 zinc finger (zf-rbx1) Chr04 + View
Populus trichocarpa Potri.017G100100 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr17 - View
Phaseolus vulgaris Phvul.003G039100 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr03 + View
Phaseolus vulgaris Phvul.008G026500 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Quercus lobata QL02p065865 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0164901 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0077300 chr08 - View
Rhododendron simsii Rhsim10G0056500 chr10 - View
Salix brachista Sabra17G0086300 GWHAAZH00000017 - View
Salix brachista Sabra04G0071300 GWHAAZH00000004 - View
Sechium edule Sed0020163 LG03 - View
Solanum lycopersicum Solyc02g089240.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QNZ5_ARTAN) SL4.0ch02 - View
Solanum lycopersicum Solyc02g065720.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QNZ5_ARTAN) SL4.0ch02 + View
Schrenkiella parvula Sp6g28330 PTHR22763//PTHR22763:SF34 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch6-6 - View
Solanum pennellii Sopen02g015940 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch02 + View
Solanum pennellii Sopen02g034030 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: response to chitin | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein . Spenn-ch02 - View
Selenicereus undatus Hund16234 Scaffold_33677 - View
Trochodendron aralioides TAR374G0179 group12 - View
Theobroma cacao Thecc.04G106300 RING/U-box superfamily protein Chromosome_4 - View
Theobroma cacao Thecc.02G325700 RING/U-box superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104823880 E3 ubiquitin-protein ligase At3g02290 NW_010966881.1 + View
Trifolium pratense TPR.G15961 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI32G0202 NC_052254.1 - View
Tripterygium wilfordii TWI60G0607 NC_052246.1 - View
Tripterygium wilfordii TWI34G1806 NC_052235.1 + View
Vaccinium macrocarpon vmacro05614 Similar to At3g02290: E3 ubiquitin-protein ligase At3g02290 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18127 Similar to At3g02290: E3 ubiquitin-protein ligase At3g02290 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G0893 CM024070.1 + View
Vitis vinifera GSVIVG01036545001 chr14 + View