Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G19180 LG-5 - View
Acer truncatum Atru.chr12.119 chr12 + View
Actinidia chinensis Actinidia29734 Lachesis_group22 - View
Actinidia chinensis Actinidia33893 Lachesis_group3 + View
Arabidopsis lyrata AL4G38220 scaffold_4 + View
Arabidopsis lyrata AL5G37460 scaffold_5 + View
Amaranthus hybridus Ah.16g104010 Protein RETICULATA-RELATED 5, chloroplastic AmaHy_arrow1_Scaffold_16 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.73F65L PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1N0RH8 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT2G40400 DUF399 family protein, putative (DUF399 and DUF3411) Encodes a chloroplast localized protein of unknown function that is involved in regulation of chloroplast development. Protein of unknown function (DUF399 and DUF3411)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF399 (InterPro:IPR007314)%2C Protein of unknown function DUF3411 (InterPro:IPR021825)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT3G56140.1)%3B Has 496 Blast hits to 496 proteins in 118 species: Archae - 0%3B Bacteria - 198%3B Metazoa - 0%3B Fungi - 0%3B Plants - 277%3B Viruses - 0%3B Other Eukaryotes - 21 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G56140 DUF399 family protein, putative (DUF399 and DUF3411) Protein of unknown function (DUF399 and DUF3411)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast thylakoid lumen%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF399 (InterPro:IPR007314)%2C Protein of unknown function DUF3411 (InterPro:IPR021825)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) (TAIR:AT2G40400.2)%3B Has 538 Blast hits to 538 proteins in 131 species: Archae - 0%3B Bacteria - 182%3B Metazoa - 33%3B Fungi - 6%3B Plants - 279%3B Viruses - 6%3B Other Eukaryotes - 32 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC02g07317 ChrC02 - View
Brassica napus A04p30770 A04 + View
Brassica napus C04p68170 C04 + View
Brassica oleracea BolC6t37503H C6 + View
Brassica oleracea BolC4t28323H C4 + View
Brassica rapa BraA04t18535Z A04 + View
Beta vulgaris EL10Ac2g04913 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0002812 hypothetical protein VITISV_028159 [Vitis vinifera] Chr1 - View
Cicer arietinum L. Ca_15169_v3 Ca_LG5_v3 + View
Corylus avellana Haze_17295 Similar to RER5: Protein RETICULATA-RELATED 5, chloroplastic (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g05880 Protein of unknown function (DUF399 and DUF3411) chr2 - View
Citrus clementina Ciclev10030811m.g scaffold_4 + View
Ceratophyllum demersum CDE07G0354 5 + View
Carpinus fangiana Cfa001256 Cfa01 - View
Cardamine hirsuta CARHR135480 Protein of unknown function (DUF399 and DUF3411) Chr4 + View
Cardamine hirsuta CARHR166290 Protein of unknown function (DUF399 and DUF3411) Chr5 + View
Carya illinoinensis CiPaw.01G302600 PF04187//PF11891 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) // Domain of unknown function (DUF3411) (DUF3411) Chr01 + View
Citrullus lanatus ClCG11G005950 Sorting nexin-4 CG_Chr11 - View
Carica papaya Cpa.g.sc19.113 supercontig_19 - View
Chenopodium quinoa AUR62012321 RER5: Protein RETICULATA-RELATED 5, chloroplastic C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62022961 RER5: Protein RETICULATA-RELATED 5, chloroplastic C_Quinoa_Scaffold_3378 + View
Capsella rubella Carub.0004s2264 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) scaffold_4 + View
Capsella rubella Carub.0005s2289 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) scaffold_5 + View
Cucumis sativus L. CsaV3_6G002050 protein RETICULATA-RELATED 5, chloroplastic chr6 + View
Daucus carota DCAR_011861 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv21799 GWHABJS00000004 - View
Erigeron canadensis ECA238G1259 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.J00163 Chr10 - View
Erythranthe guttata Migut.F01461 scaffold_6 - View
Erythranthe guttata Migut.F00620 scaffold_6 - View
Eutrema salsugineum Thhalv10005804m.g PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) scaffold_19 - View
Eutrema salsugineum Thhalv10016304m.g PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) scaffold_10 + View
Fragaria x ananassa FAN06G3540 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Fvb7-2 + View
Fragaria x ananassa FAN03G1866 PF04187//PF11891 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) // Domain of unknown function (DUF3411) (DUF3411) Fvb7-3 - View
Fragaria x ananassa FAN01G2884 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Fvb7-4 - View
Fragaria x ananassa FAN10G1819 PF04187//PF11891 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) // Domain of unknown function (DUF3411) (DUF3411) Fvb7-1 + View
Fragaria vesca FvH4_7g25380 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Fvb7 + View
Glycine max Glyma.11G233800 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Gm11 + View
Glycine max Glyma.18G023200 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Gm18 - View
Helianthus annuus HanXRQChr07g0203501 Putative haem-binding uptake, Tiki superfamily, ChaN; Protein RETICULATA-related HanXRQChr07 + View
Lupinus albus Lalb_Chr11g0075101 PF04187//PF11891 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) // Domain of unknown function (DUF3411) (DUF3411) Lalb_Chr11 + View
Lupinus albus Lalb_Chr08g0231381 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Lalb_Chr08 - View
Lotus japonicus Lj6g0017401 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) chr6 - View
Lonicera japonica Lj1C962G10 GWHAAZE00000001 + View
Lonicera japonica Lj8A60T48 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_2_125780 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Lsat_1_v8_lg_2 + View
Malus domestica MD01G1160000 Protein of unknown function (DUF399 and DUF3411) Chr01 + View
Manihot esculenta Manes.10G007200 Chromosome10 - View
Manihot esculenta Manes.07G135966 Chromosome07 + View
Medicago truncatula Medtr3g071970 DUF399 family protein chr3 + View
Nelumbo nucifera Nn2g11022 chr2 + View
Oryza sativa ssp. japonica Os01g0826900 Domain of unknown function DUF399 domain containing protein. chr01 - View
Petunia axillaris Peaxi162Scf00284g00235 Protein of unknown function (DUF399 and DUF3411) Peaxi162Scf00284 - View
Punica granatum PGR044G0181 NC_045134.1 + View
Prunus persica Prupe.2G258000 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Pp02 + View
Papaver somniferum PSO339G3904 NC_039366.1 + View
Populus trichocarpa Potri.008G074300 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Chr08 + View
Phaseolus vulgaris Phvul.001G247100 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) Chr01 + View
Quercus lobata QL08p064026 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0371311 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim03G0148300 chr03 + View
Striga asiatica SGA_v2.0_scaffold44G16654 scaffold44 - View
Salvia bowleyana SalBow3G0728 GWHASIU00000006 + View
Salvia bowleyana SalBow5G3910 GWHASIU00000003 - View
Salix brachista Sabra08G0055300 GWHAAZH00000008 + View
Sechium edule Sed0021910 LG03 - View
Sechium edule Sed0027098 LG11 - View
Solanum lycopersicum Solyc06g050620.3 DUF399 family protein, putative (DUF399 and DUF3411) (AHRD V3.3 *** A0A1P8B2W9_ARATH) SL4.0ch06 + View
Schrenkiella parvula Sp5g06390 PF04187 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) ch5-1 - View
Schrenkiella parvula Sp4g22720 PF04187//PF11891 - Haem-binding uptake, Tiki superfamily, ChaN (Cofac_haem_bdg) // Domain of unknown function (DUF3411) (DUF3411) ch4-6 + View
Solanum pennellii Sopen06g016190 Protein of unknown function (DUF399 and DUF3411) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast thylakoid lumen, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF399 , Protein of unknown function DUF3411 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF399 and DUF3411) Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400023943 Conserved gene of unknown function ST4.03ch06 + View
Selenicereus undatus Hund15866 Scaffold_33677 - View
Trochodendron aralioides TAR623G1694 group7 - View
Tarenaya hassleriana THA.LOC104810131 protein RETICULATA-RELATED 6%2C chloroplastic NW_010965122.1 + View
Vaccinium macrocarpon vmacro06911 Similar to RER5: Protein RETICULATA-RELATED 5, chloroplastic (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G3076 CM024070.1 + View
Vanilla planifolia HPP92_019705 CM028159.1 - View
Vitis vinifera GSVIVG01032735001 chr13 + View
Zea mays Zm00001eb351960 Zm00001e027293 Protein RETICULATA-RELATED 6 chloroplastic 8 + View
Zea mays Zm00001eb149270 Zm00001e019415 Protein RETICULATA-RELATED 6 chloroplastic 3 + View