Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Sc12g0006230 GWHAASQ00000012 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G4540 LG-2 + View
Acer truncatum Atru.chr8.86 chr8 + View
Actinidia chinensis Actinidia11499 Lachesis_group21 + View
Arabidopsis lyrata AL1G38670 scaffold_1 + View
Avicennia marina MSTRG.23025 ScioBoG_3703_HRSCAF_3719 - View
Avicennia marina MSTRG.7821 ScioBoG_102841_HRSCAF_103114 + View
Amaranthus hybridus Ah.02g131960 Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial (Protein CHLORORESPIRATORY REDUCTION 28) AmaHy_arrow1_Scaffold_2 - View
Aquilegia oxysepala Aqoxy3G03317 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YHJ5ZY PTHR11240//PTHR11240:SF20 - RIBONUCLEASE T2 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.F1ZF7M PTHR11240//PTHR11240:SF20 - RIBONUCLEASE T2 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT2G02750 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT2G13600.1)%3B Has 42683 Blast hits to 13925 proteins in 241 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 114%3B Fungi - 172%3B Plants - 41670%3B Viruses - 0%3B Other Eukaryotes - 723 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT1G27440 Exostosin family protein GUT2%3B FUNCTIONS IN: glucuronoxylan glucuronosyltransferase activity%2C catalytic activity%3B INVOLVED IN: secondary cell wall biogenesis%2C glucuronoxylan biosynthetic process%3B LOCATED IN: endomembrane system%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263)%3B BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT5G61840.1)%3B Has 1460 Blast hits to 1436 proteins in 120 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 310%3B Fungi - 4%3B Plants - 1003%3B Viruses - 0%3B Other Eukaryotes - 129 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC05g24899 ChrC05 - View
Brassica carinata BcaB03g14092 ChrB03 - View
Brassica carinata BcaB03g12027 ChrB03 + View
Brassica napus A06p40420 A06 + View
Brassica napus A07p13140 A07 - View
Brassica napus A06p06980 A06 + View
Brassica rapa BraA06t26960Z A06 + View
Brassica rapa BraA06t23914Z A06 + View
Beta vulgaris EL10Ac6g13162 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0001936 hypothetical protein VITISV_029224 [Vitis vinifera] Chr12 - View
Camellia sinensis var. sinensis CSS0033362 PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Malus domestica] Chr6 + View
Cicer arietinum L. Ca_24246_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_22872_v3 Ca_LG7_v3 - View
Cicer arietinum L. Ca_04750_v3 Ca_LG2_v3 - View
Corylus avellana Haze_12051 Similar to PCMP-E22: Pentatricopeptide repeat-containing protein At2g02750 (Arabidopsis thaliana OX%3D3702) 9 + View
Carpinus fangiana Cfa009019 Cfa03 + View
Cardamine hirsuta CARHR145190 Pentatricopeptide repeat-containing protein Chr5 - View
Carya illinoinensis CiPaw.12G013800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr12 - View
Carya illinoinensis CiPaw.06G081700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr06 - View
Citrullus lanatus ClCG05G024610 Pentatricopeptide repeat-containing family protein CG_Chr05 - View
Cucumis melo MELO3C012057.2 Pentatricopeptide repeat-containing protein chr10 - View
Chenopodium quinoa AUR62028823 PCMP-E22: Pentatricopeptide repeat-containing protein At2g02750 C_Quinoa_Scaffold_2837 + View
Chenopodium quinoa AUR62008375 Protein of unknown function C_Quinoa_Scaffold_3422 + View
Chenopodium quinoa AUR62005738 PCMP-E22: Pentatricopeptide repeat-containing protein At2g02750 C_Quinoa_Scaffold_1214 - View
Capsella rubella Carub.0005s0718 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) scaffold_5 - View
Capsella rubella Carub.0005s0166 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_5 - View
Cucumis sativus L. CsaV3_5G032160 Pentatricopeptide repeat-containing protein, putative chr5 - View
Daucus carota DCAR_016547 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv09169 GWHABJS00000019 - View
Durio zibethinus Duzib248G0492 NW_019168048.1 - View
Durio zibethinus Duzib264G0315 NW_019167960.1 - View
Durio zibethinus Duzib187G1025 NW_019167860.1 - View
Eucalyptus grandis Eucgr.B00461 Chr02 - View
Eucalyptus grandis Eucgr.B03402 Chr02 + View
Erythranthe guttata Migut.L01331 scaffold_12 + View
Eutrema salsugineum Thhalv10009465m.g PF13041 - PPR repeat family (PPR_2) scaffold_5 - View
Eutrema salsugineum Thhalv10009648m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_5 - View
Eutrema salsugineum Thhalv10005682m.g PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) scaffold_6 + View
Fragaria x ananassa FAN22G1337 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb4-1 + View
Fragaria x ananassa FAN17G2920 K01166 - ribonuclease T2 [EC:3.1.27.1] (E3.1.27.1) Fvb4-2 + View
Fragaria x ananassa FAN07G2306 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-4 - View
Gossypium hirsutum Gohir.A03G148000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A03 + View
Gossypium hirsutum Gohir.D02G171200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D02 + View
Gossypium hirsutum Gohir.A13G071700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A13 - View
Gossypium hirsutum Gohir.D07G211000 K10683 - BRCA1-associated RING domain protein 1 [EC:6.3.2.19] (BARD1) D07 - View
Gossypium hirsutum Gohir.D13G072000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D13 - View
Glycine max Glyma.18G134700 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm18 + View
Glycine max Glyma.02G020100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm02 + View
Glycine max Glyma.02G102000 PTHR24015:SF894 - PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN Gm02 + View
Gossypium raimondii Gorai.006G023300 Chr06 + View
Gossypium raimondii Gorai.001G238400 Chr01 - View
Lupinus albus Lalb_Chr04g0256271 Lalb_Chr04 + View
Lupinus albus Lalb_Chr10g0098021 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr10 - View
Lotus japonicus Lj2g0024822 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr2 - View
Magnolia biondii MBI05_g35464_MAGBIO AED:0.39 Chr05 + View
Magnolia biondii MBI02_g05740_MAGBIO AED:0.41 Chr02 + View
Malus domestica MD14G1196900 Tetratricopeptide repeat (TPR)-like superfamily protein Chr14 - View
Malus domestica MD16G1077500 Pentatricopeptide repeat (PPR) superfamily protein Chr16 + View
Malus domestica MD17G1046400 Tetratricopeptide repeat (TPR)-like superfamily protein Chr17 - View
Manihot esculenta Manes.02G043400 Chromosome02 + View
Manihot esculenta Manes.05G096150 Chromosome05 + View
Medicago truncatula Medtr5g038580 PPR containing plant-like protein chr5 - View
Medicago truncatula Medtr4g108030 PPR containing plant-like protein chr4 + View
Olea europaea Oeu057545.1 chr6 - View
Petunia axillaris Peaxi162Scf00129g00525 Pentatricopeptide repeat-containing protein Peaxi162Scf00129 - View
Punica granatum PGR083G2611 NC_045133.1 - View
Punica granatum PGR004G0826 NC_045131.1 - View
Punica granatum PGR119G1702 NC_045132.1 - View
Papaver somniferum PSO832G4365 NC_039367.1 + View
Papaver somniferum PSO017G3478 NC_039362.1 - View
Papaver somniferum PSO832G2087 NC_039367.1 + View
Papaver somniferum PSO161G0066 NW_020649304.1 - View
Papaver somniferum PSO017G3173 NC_039362.1 + View
Phaseolus vulgaris Phvul.002G089500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 + View
Rosa chinensis RcHm_v2.0_Chr2g0168261 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0067000 chr08 + View
Rhododendron simsii Rhsim08G0158000 chr08 + View
Salvia bowleyana SalBow2G2607 GWHASIU00000007 - View
Solanum lycopersicum Solyc01g010510.4 Pentatricopeptide repeat-containing protein, mitochondrial (AHRD V3.3 *** A0A2G2X910_CAPBA) SL4.0ch01 - View
Solanum lycopersicum Solyc02g087610.1 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QFA4_9MAGN) SL4.0ch02 + View
Schrenkiella parvula Sp2g17310 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) ch2-4 - View
Schrenkiella parvula Sp2g13860 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch2-4 - View
Solanum pennellii Sopen01g006160 Pentatricopeptide repeat (PPR) superfamily protein | LOCATED IN: mitochondrion | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 22 Spenn-ch01 - View
Trochodendron aralioides TAR371G1009 group13 - View
Theobroma cacao Thecc.02G234500 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_2 + View
Theobroma cacao Thecc.03G081800 Chromosome_3 + View
Theobroma cacao Thecc.02G350000 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_2 + View
Theobroma cacao Thecc.02G353600 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104801784 pentatricopeptide repeat-containing protein At2g02750 NW_010970030.1 - View
Tripterygium wilfordii TWI79G1282 NC_052238.1 + View
Utricularia gibba unitig_749.g13238 unitig_749 + View
Vaccinium macrocarpon vmacro16333 Similar to PCMP-E22: Pentatricopeptide repeat-containing protein At2g02750 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0975 CM024074.1 + View
Vigna mungo VMungo1309G1164 CM024072.1 - View